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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHT28065.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | NF-YC | ||||||||
Protein Properties | Length: 326aa MW: 36193.1 Da PI: 5.4951 | ||||||||
Description | NF-YC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YC | 120.2 | 8.8e-38 | 2 | 98 | 5 | 99 |
NF-YC 5 fwekq...iekatdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdivprd 99 fw+ + ie++t+++nh+lPlari+k k ++vk+isae+P+l+skacelfi eltlrsw ha+en+r +++ +d+aaa+ rtd fdfl vp+d PHT28065.1 2 FWHFKrheIEHSTNLRNHQLPLARIRKTAKDTPNVKKISAEVPILFSKACELFIQELTLRSWFHADENNRYSVQGNDVAAAIRRTDHFDFLAH-VPTD 98 56543344**********************************************************************************975.5555 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 326 aa Download sequence |
MFWHFKRHEI EHSTNLRNHQ LPLARIRKTA KDTPNVKKIS AEVPILFSKA CELFIQELTL 60 RSWFHADENN RYSVQGNDVA AAIRRTDHFD FLAHVPTDEI MGEATAAATV TGVVGSTSSG 120 VPDYNPPMGQ PGPSEVTMGR ASVPLVHPSA YFQPQSWQPT PSLPQVWQPQ PPQSQAWPSS 180 SSALQPQPLL QWWQPPPPQF QAWQLPPSFS QAWQPQPPQS LAWPSSSGAW QPQPLPSPSS 240 SQGWQLPPPQ SQAWQLLPSS SQAWQLQPSS SQAWQLQPSS SQEGQPQPPP SQECQWVWQP 300 VEDNPDNPSG DGGNPDGHRT DILEGL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G48590.1 | 4e-46 | NF-YC family protein |