PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT27411.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family B3
Protein Properties Length: 263aa    MW: 29834.2 Da    PI: 8.4327
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT27411.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B3536.2e-17163255898
                 -HHHHTT-EE--HHH.HTT....---..--SEEEEEETTS-EEEEEE..EEETTE..EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
          B3   8 sdvlksgrlvlpkkfaeeh....ggkkeesktltledesgrsWevkliyrkksgr..yvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
                    l+++rlv+pkk+ae++    +g+++  + + + d++g++W++ ++++ +s++  yvl+ G +++  +++ ++gD+v+F++++  +++lv+++++
  PHT27411.1 163 DADLALSRLVIPKKCAEAYfpplSGPHK--IPINILDTEGKEWNFHYRFWPNSRSkmYVLE-GLRDYMVSKKWRAGDVVTFYRIE-PGQKLVMGLRN 255
                 5567889**************8766654..569999*************777777758888.********************887.66667777766 PP
Sequence ? help Back to Top
Protein Sequence    Length: 263 aa     Download sequence    
MASSSTCSSG STTLCFQCED SSNSVNFRNG WRLRSGKFAQ LCHRCASVYE YGRFCETFHA  60
SDDGWRDCES CGKLVHCGCI VSFNTYLLLD FGGIMCMECS KKNFILARNR CLSDETPPVP  120
TVESRLNATQ TMLEPRYRPR VTELKLQNIS IKYPLLCTQL SCDADLALSR LVIPKKCAEA  180
YFPPLSGPHK IPINILDTEG KEWNFHYRFW PNSRSKMYVL EGLRDYMVSK KWRAGDVVTF  240
YRIEPGQKLV MGLRNTSAGS TNS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G32010.14e-36B3 family protein