PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT27400.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family B3
Protein Properties Length: 292aa    MW: 33695.5 Da    PI: 6.2694
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT27400.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B331.82.5e-102731995
                -HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS
          B3 19 pkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95
                p +f++e++  k   kt  l++ +g  Wevk   r +++ ++ ++ W +Fv  + L+ gD+++F+l+++s+f  +v 
  PHT27400.1  2 PGPFVKENK--KMLAKTALLKTNEGMLWEVKK-ARETPDYFICKGDWPRFVVHHMLELGDMLIFYLVDKSTF--HVL 73
                889999997..558889**************9.5777777888999********************987888..665 PP
Sequence ? help Back to Top
Protein Sequence    Length: 292 aa     Download sequence    
MPGPFVKENK KMLAKTALLK TNEGMLWEVK KARETPDYFI CKGDWPRFVV HHMLELGDML  60
IFYLVDKSTF HVLPYSKKPC TNIRHLEDLS SSEEEEKNTE FGTSRGCKKV KTEPKALSDT  120
NFSKELHQSR IDRMSKAIKE IAFKKQQIQK PFEKGDEVEV ASQEDGLIGS YYTATIISPI  180
GSYLYRVKYK TLFSDDESVP LEDVVTASKV RPVPPDQRKI LSENNFRLYD VVDVFANDGW  240
WFGFINGIVG EELYVYFPTT ADNIAYPPDV LRLHQEWSNG KWIFPPEQGI FN