PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHT27226.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | ERF | ||||||||
Protein Properties | Length: 149aa MW: 16523 Da PI: 9.0511 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 23.5 | 1.4e-07 | 51 | 100 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 +y+GV+ + +g++ A rdp+ + ++ lg+f+t ee +a++ ++ +++g PHT27226.1 51 HYRGVWKRL-SGKYTAATRDPR----KiCNVLLGTFDTMEEGGQAYDTMAIEFRG 100 6****7666.8******9**83....359*********************99987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 149 aa Download sequence |
MYLPHDAQEA PGSSLLRRHL RQLKGVTRVE NVNGGVAKAE EKVKGVAEEV HYRGVWKRLS 60 GKYTAATRDP RKICNVLLGT FDTMEEGGQA YDTMAIEFRG VKVKMNFLNL MDEMNRTPSQ 120 VSTVESLNVV AVVEIQPSPL PLPPPQPPP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G15210.1 | 5e-20 | ERF family protein |