PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHT26905.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | MYB_related | ||||||||
Protein Properties | Length: 163aa MW: 18031.8 Da PI: 10.7236 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 39.6 | 1.2e-12 | 5 | 55 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.....TTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg.....kgRtlkqcksrwqk 46 +++WT++E+ l+ +v+++G+g W+tI + R+ ++k++w++ PHT26905.1 5 KQKWTPDEEAALKAGVHKYGPGKWRTILKDPEfskvlSSRSNVDLKDKWRN 55 79***********************************9************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 163 aa Download sequence |
MGAPKQKWTP DEEAALKAGV HKYGPGKWRT ILKDPEFSKV LSSRSNVDLK DKWRNMSVIA 60 NGWGSREKAR LALKRMNQAR KQDESSLAVI TEAKSDEKMA EARLATTSIG SPQIGGSKRS 120 IIRLDNLIME AISNLKESGG SNKASIATYI EVLIFLLSLM SKR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G49950.1 | 2e-61 | MYB_related family protein |