PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHT25800.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | ERF | ||||||||
Protein Properties | Length: 165aa MW: 18099.4 Da PI: 9.0462 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 46.2 | 1.1e-14 | 21 | 68 | 2 | 53 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkl 53 +y+GVr ++ +gr++AeIrdp + +++lg+f+t eA a++a + ++ PHT25800.1 21 HYRGVRKRP-WGRYAAEIRDP-----HrkCKVWLGTFDTTVEAGIAYDATAIAY 68 7********.**********6.....2269*******************99887 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 165 aa Download sequence |
MAHRHRHMAA VTATTVEKEV HYRGVRKRPW GRYAAEIRDP HRKCKVWLGT FDTTVEAGIA 60 YDATAIAYDA TAIEFRGVKA KTNFPIPVDL TRSPSETQNN LDARGGGGGL DRGEMFHTNG 120 FGSVIMGSDA GDLSKSDFSS VVDFMGNDTK GIQLDLNFPP VPKKM |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G44210.1 | 2e-27 | ERF family protein |