PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT25448.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family WRKY
Protein Properties Length: 132aa    MW: 14982.5 Da    PI: 10.781
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT25448.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY29.51.5e-09112131221
                 --SS-EEEEEEE--TT-SS- CS
        WRKY   2 dDgynWrKYGqKevkgsefp 21 
                  D+++WrKYGqK++kgs++p
  PHT25448.1 112 TDECSWRKYGQKSIKGSPYP 131
                 699****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 132 aa     Download sequence    
MREIIKVKAQ LSKEFEIKDL RAAKKILGME IMRDREKYER SRSISCVSIP ASSMLLHLVA  60
QVISTGKQPS ATGKRCREQE QSSDGSGKKR KVFPRKVIRT PVISSKITDI PTDECSWRKY  120
GQKSIKGSPY PQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31550.22e-17WRKY family protein