PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP045050.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family ERF
Protein Properties Length: 385aa    MW: 43592 Da    PI: 5.6696
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP045050.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2476.2e-15156203354
          AP2   3 ykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkkle 54 
                   kGVr++k +g+++AeIrd +     +  r +lg+f taeeAa+a+ + ++++e
  PCP045050.1 156 PKGVRRRK-WGKYAAEIRDpF-----QgIRKWLGTFNTAEEAAAAYQQKKREFE 203
                  59***998.**********55.....45******************99998876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 385 aa     Download sequence    
MSSRFYLSTG APKKLWKSYQ PLFCMHKQIA SVFSMPLRSQ RGFRGFKFKM PGMKTVILNQ  60
HVSWNKLKKK QPTVEENAGY MKRIRIIYND PDATDSSSED DEAYDIEGNL FQHGKRFVSE  120
ILVVETERES SAGTNGGRIG HSTDFYDSKK SNRVLPKGVR RRKWGKYAAE IRDPFQGIRK  180
WLGTFNTAEE AAAAYQQKKR EFETIQSQQR TKSHCENMPL SDKHEFESMQ LTEGAKHELQ  240
SVPLSEESQD SSFCHPSPSS VLEMSGSAAL CIGLERLKEE SGVEVSGGEG TLQQPVFEEE  300
ESIPMLPPLD VEQLNLGCGD NYVFSSLDQF FDGMCDIVDD GMTDTVDYPV CKDKKGEATC  360
LPPLDFNFGQ QDFSWIDHKL EHGKP
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1157163KGVRRRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49120.14e-14ERF family protein