PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP044792.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family SBP
Protein Properties Length: 189aa    MW: 21217.3 Da    PI: 9.7133
Description SBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP044792.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SBP131.43e-4174149277
                  -SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S-- CS
          SBP   2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkq 77 
                  Cq+e+C adl +ak+yhrrhkvCe+hska+vv+vsg++qrfCqqCsrfhel efDe+krsCrrrLa+hn+rrrk++
  PCP044792.1  74 CQAERCGADLVDAKRYHRRHKVCEFHSKAAVVIVSGTRQRFCQQCSRFHELIEFDEAKRSCRRRLAGHNQRRRKSS 149
                  **************************************************************************87 PP
Sequence ? help Back to Top
Protein Sequence    Length: 189 aa     Download sequence    
MEGKNFEGRQ TWKEKSKKDV EEVEDDYSDE EDTSGGGGGL MLRFEENERQ KKAAAAGRRG  60
SGGGGGGGVS QPSCQAERCG ADLVDAKRYH RRHKVCEFHS KAAVVIVSGT RQRFCQQCSR  120
FHELIEFDEA KRSCRRRLAG HNQRRRKSSG EPYGESSSRR GVGHQYNESQ TRYQITPPGN  180
SSSKRCQIR
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1143148QRRRKS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G53160.15e-48SBP family protein