PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP044584.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family ERF
Protein Properties Length: 323aa    MW: 35926.5 Da    PI: 8.0574
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP044584.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP267.42.8e-21132181255
          AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                   y+GVr+++ +g+WvAeIr p++   rkr +lg+f+taeeAa a+++a+ kl+g
  PCP044584.1 132 LYRGVRQRH-WGKWVAEIRLPRN---RKRLWLGTFDTAEEAALAYDKAAFKLRG 181
                  59******9.**********954...5*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 323 aa     Download sequence    
MAKAIDLYSS STMTPDLSDL LGEDQLMKAL MPFMKSASST SPSTSYSYPP QNNQNFNLYF  60
CSSPMISQAG AIGLNQLIPS QILQTQSQMI RQQHQQKQQI SAFASSAAYL KLLSTKAIPM  120
KTAGTPSKLT KLYRGVRQRH WGKWVAEIRL PRNRKRLWLG TFDTAEEAAL AYDKAAFKLR  180
GDFARLNFPH LKQQGAHVSG AFGRYKPLHS SVDAKLQAIC QSLAANSMKQ GNTGEPCSVA  240
ETKPVVSAPL ETRMDDSFKT ELKSEWEAFS SSSSSPFWSD RSDEASTPES DITFLDFSDS  300
QWDEAENFGL EKYPSVEIDW SAI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G39780.13e-58ERF family protein