PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP044502.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family MYB_related
Protein Properties Length: 352aa    MW: 38473.3 Da    PI: 9.5385
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP044502.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding42.21.9e-1381125147
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      r +WT++E++++++a +++  + Wk+I + +g  +t  q++s+ qky
      PCP044502.1  81 RESWTEQEHDKFLEALQLFDRD-WKKIEAFIG-SKTVIQIRSHAQKY 125
                      789*****************77.*********.*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 352 aa     Download sequence    
MLSLNPNPAQ GFYLFDPMIT NMGLPGLNTM PPPTTGGASA TAATSTTAAC TSSSAPANAA  60
SMSADDQSKK IRKPYTITKS RESWTEQEHD KFLEALQLFD RDWKKIEAFI GSKTVIQIRS  120
HAQKYFLKVQ KKGTSEHVPP PRPKRKATHP YPQKAPKSAA VVSQVAGPFQ SSSQLLEHGY  180
VYQPDSSFVL GTPVDAATLS SWSYNSVPPV NVSQTIKDEG RLSGPTVTHN SCYSSSNESN  240
PTNWKVSETV DRVDPGQPHR VLPDFAQVYK FIGSVFDPGA VGHLERLRQL DPINFETALL  300
LMRNLSINLT SPEFQDHRKL ITSYAVGSNK TKSDGNCNFS RIGKSENAIL SA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G01520.11e-102MYB_related family protein