PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP041628.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family NAC
Protein Properties Length: 305aa    MW: 35208 Da    PI: 6.1915
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP041628.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM75.41.4e-2371441128
          NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykv.ePwdLpk.........kvka..eekewyfFskrdkkyatgkrknra..tksgyWk 84 
                  +p+G+rF P+d+el+ +yL++k++g++ +   +++++d++ + eP+d+ +         +  +  ++k++y F++ + k+++g+r  r+  t+ g+Wk
  PCP041628.1   7 VPVGYRFMPRDDELLLDYLRPKLDGQDYPK-GIVHDCDLHGLeEPSDIWRrlsrashegH--EctDDKDIYVFTTLNLKAPNGSRFCRTvgTTGGTWK 101
                  599************************999.89*******9978****643566555442..14377799******************645779**** PP

          NAM  85 atgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
                       k+++++  ++++g +k +++ ++ +  +++ +W+mhe++l
  PCP041628.1 102 GEDAGKKIYASgIKHAIGFRKRFTYRNKGS--PQNDHWIMHEFHL 144
                  *********9855677*********95444..459*********8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 305 aa     Download sequence    
MAGYYQVPVG YRFMPRDDEL LLDYLRPKLD GQDYPKGIVH DCDLHGLEEP SDIWRRLSRA  60
SHEGHECTDD KDIYVFTTLN LKAPNGSRFC RTVGTTGGTW KGEDAGKKIY ASGIKHAIGF  120
RKRFTYRNKG SPQNDHWIMH EFHLDPSLLR NKHHQEKNIV LCILRRKDDI SKKRKLEERD  180
NYEENAANHF QPQALNAINV GDYNNAPIYM EQIAFDHSQP LALTATTIGD YSNDPRYPEE  240
NVANHFQPQE FDATTTGDYS NTHWYTEQNA ADHFEPHDQA CNATNEDLTT ALRRMEEILM  300
SGFRG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G62700.11e-19NAC family protein