PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP039950.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family MYB_related
Protein Properties Length: 161aa    MW: 17783.9 Da    PI: 7.7641
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP039950.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding32.81.7e-1017412348
                     -HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding 23 tWktIartmgkgRtlkqcksrwqkyl 48
                      W++Ia +++ gRt++q+k++w+++l
      PCP039950.1 17 GWSLIAGRVP-GRTDNQVKNHWNTHL 41
                     5*********.************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 161 aa     Download sequence    
MWVRLGPGSR PGVGGVGWSL IAGRVPGRTD NQVKNHWNTH LSKKLGVSSK KGKTKAKTYP  60
DSERAKKNSF TPLSNSNSEL QPLPNSDSNS NIFGDDEVAA VINGFDDKIM NVKDNNIGFK  120
SGVGFSEMWE AMMISNDLNL YSSYLLDPTL DDHYPFQFDN L
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G14750.12e-09MYB family protein