PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP037831.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family MYB_related
Protein Properties Length: 272aa    MW: 30925.6 Da    PI: 6.282
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP037831.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding32.42.2e-101363146
                     TSSS-HHHHHHHHHHHHHTTTT......-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGgg......tWktIartmgkgRtlkqcksrwqk 46
                     rg W++eEde+l +    +  +      +W+ Ia++++ gRt++++k++w++
      PCP037831.1 13 RGLWSPEEDEKLSNHPWSWQLEfcpkirRWAQIAKHLP-GRTDNEVKNFWNS 63
                     788**********9988888889999************.***********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 272 aa     Download sequence    
MGHRCCGKQK VKRGLWSPEE DEKLSNHPWS WQLEFCPKIR RWAQIAKHLP GRTDNEVKNF  60
WNSCIKKKLM SQGLDPKTHN LLPNSHHQRS ASSKVASSSQ SPLLQLHNQQ QPIQVPFTEI  120
NASPINVTLR TYQYHDLDQN PCNASWTRVE DPTFNDITNL PHQPSTDHST LINNIPSSSS  180
SSSVNLSVFG LLENSNIWLS GADPFEVPRI VLGEQSKGEE VVLQQEKETL LDQMEIKRIE  240
DMDHASIFES SSIDFSFVES TLMSTTVLRE PD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G12720.19e-35MYB family protein