PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP031284.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family HSF
Protein Properties Length: 402aa    MW: 45620.2 Da    PI: 4.6159
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP031284.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind106.81.7e-33191102102
                   HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXX CS
  HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekik 98 
                   Fl+k ye+++d++++++i+wse+g+sf++ld+ +f+ ++LpkyFkhsnf+SF+RQLn+YgF+k+++++         w F+++ F +g+k ll++i 
   PCP031284.1  19 FLRKCYEMVDDKDTDSIITWSETGDSFAILDMAQFSISMLPKYFKHSNFSSFMRQLNIYGFRKIDSDR---------WVFANEGFIRGQKILLKNIA 106
                   9****************************************************************999.........******************** PP

                   XXXX CS
  HSF_DNA-bind  99 rkks 102
                   r+k+
   PCP031284.1 107 RRKH 110
                   *986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 402 aa     Download sequence    
MVKSAEKGGG EGSGPVAPFL RKCYEMVDDK DTDSIITWSE TGDSFAILDM AQFSISMLPK  60
YFKHSNFSSF MRQLNIYGFR KIDSDRWVFA NEGFIRGQKI LLKNIARRKH PQGTDQKKAS  120
QQSPDRPSEN ISENGLWREI ENLKTDKVAL KQELAKLRQH QETSQNNLRL LRDRLCGMEK  180
NQQQMLSFLV MAMQSPGFLV QLLQPKENNW RIAEAGDMIE QCVDDDKPVV SNGAIVRYQP  240
PMIEAPKHVL LPNSGSEKQP ESDAYLDGME DSVVNADFMK MLMDERSSPV ENHDPYTLPD  300
ISDNGAWEQL LLASPFLENI EGTKENGEEH ADTRMEVEPI VSDLDNSRDF DYLVEQMKKS  360
QNFALESTVY GANMESSQNL EFITEHMGHL ASDSNMETKS GT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G67970.11e-102HSF family protein