PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP030684.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family HSF
Protein Properties Length: 297aa    MW: 33405.6 Da    PI: 7.09
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP030684.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind1124.2e-35261162101
                   HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXX CS
  HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekik 98 
                   Fl+k+y++++d++++++isw+++g+sfvv +++ fa+++LpkyFkh+nf+SFvRQLn+YgF+kv  ++         weF+++ F++g+k+ll++i+
   PCP030684.1  26 FLTKTYRLVDDPSIDDVISWNDDGSSFVVGNPTVFARDLLPKYFKHNNFSSFVRQLNTYGFRKVGPDR---------WEFANDCFQRGQKRLLCEIQ 113
                   9****************************************************************999.........******************** PP

                   XXX CS
  HSF_DNA-bind  99 rkk 101
                   r++
   PCP030684.1 114 RRR 116
                   *97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 297 aa     Download sequence    
MAPTPVEPNG ESTYGESLQR ALPTPFLTKT YRLVDDPSID DVISWNDDGS SFVVGNPTVF  60
ARDLLPKYFK HNNFSSFVRQ LNTYGFRKVG PDRWEFANDC FQRGQKRLLC EIQRRRITPP  120
APPVASAWAV PTAKSMMSPS NSSDEQVISS SSSPNRAPSK LMHENERLRK ENMHLTKELA  180
EVKSLCNSIF SMVSNYACSQ SESGFPELKP LDLMPGKRFS VKGEKEEEEE ARPKLFGVAL  240
GAKRPREASG HGSEEDETDL RLQQPSDREV KSEPLDAGHK ETPWLKQCHM ASQRVCN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G62020.11e-79HSF family protein