PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP030637.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

DBB

Protein Properties

Length: 290aa MW: 31120.9 Da PI: 5.1681

Description

DBB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP030637.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	18	6e-06	4	45	5	40
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHkg......Htvv 40 C+ +e e++ C ++ lC C ++ Hk H++v PCP030637.1 4 QCNVCEAAEANVLCCADEAALCWACDEKVHKAnklaskHQRV 45 7****99*******************888888888876 PP
2	zf-B_box	26.6	1.3e-08	52	92	3	37
zf-B_box 3 erkCpeHeekelqlfCedCqqllCedClleeHkg......H 37 +kC+ ++e +fC +++ llC++C ++ H H PCP030637.1 52 LPKCDICQEAVGYFFCLEDRALLCRKCDVAVHTAnsfvsaH 92 589*****9******************9554555555 PP

Sequence ? help Back to Top
Protein Sequence Length: 290 aa Download sequence
MKIQCNVCEA AEANVLCCAD EAALCWACDE KVHKANKLAS KHQRVRLSSS HLPKCDICQE 60 AVGYFFCLED RALLCRKCDV AVHTANSFVS AHRRFLLTGI KVGPEPAQPD FGDGDGVGAS 120 SSTMKSRPGS GSGSVSRCET HDSLPVECKA ALPGVAGGMS FTGGSSAGTV PQCYIDEFLG 180 LSDLDQSFGY IDNGSSKADC GKLGEYGSPV LRSSEEELDD YECIGEVPEA SWMVPQIPSP 240 PTASGLYWPK SLQNPSDSST MFVPDICHSQ MENPFCSQHN GTVSKRRRQF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G78600.1	7e-88	DBB family protein