PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP029982.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

GRF

Protein Properties

Length: 464aa MW: 49387.3 Da PI: 9.9992

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP029982.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	73.1	3.2e-23	123	168	1	46
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskees 46 d+epgrCrRtDGKkWRCs+ v++g+k+C+ H+hrg++rsrk++e+s PCP029982.1 123 DPEPGRCRRTDGKKWRCSKSVVPGQKYCQQHMHRGCQRSRKHVETS 168 79*****************************************975 PP
2	WRC	63.1	4.2e-20	344	384	2	42
WRC 2 aepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrks 42 ep+rCrRtDGKkWRC+r+vl+++k+C H+hrg +r++k PCP029982.1 344 LEPRRCRRTDGKKWRCRRDVLPDQKYCGLHVHRGAKRQTKD 384 59************************************997 PP
3	QLQ	57.4	4.3e-20	52	86	3	37
QLQ 3 FTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 FTaaQl++L+ Q+l+yK+Laa++PvP +Ll++i++ PCP029982.1 52 FTAAQLHELEEQALIYKHLAAGVPVPVQLLVPIWN 86 **********************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 464 aa Download sequence
MEDGIVRRAK EEREEVKLGL GIGVGCNYGG QNGKKKKMKC GGGGGGGCGG GFTAAQLHEL 60 EEQALIYKHL AAGVPVPVQL LVPIWNSVAA SFGSSNAAAI YQHFPTFIGF NPVGGFDYRS 120 KMDPEPGRCR RTDGKKWRCS KSVVPGQKYC QQHMHRGCQR SRKHVETSET SSPSSAKQPK 180 NSDAELCSSK TNVQISTPNG LHLKAQSSDN IGVSQGTTTA SNGYQECKTN IRSVRTTSVA 240 MIPANRTATS PASAVTIAHA GPTAATNSSS NKNSISIGVK DYSSSHAGDN CMIRGSSLNR 300 NSTIVGSTIS PGLGFSPKSV LQGRQMTFLI SNGVCFNNSS GTELEPRRCR RTDGKKWRCR 360 RDVLPDQKYC GLHVHRGAKR QTKDSQPIGV PSSSAASMNT AQISQTISTT TKTDRAIPNT 420 NLSMSIPARP PPMQNDEKSN SSGDSDTTIT DTSLAAYEGS YVSS

Sequence ? help Back to Top

Protein Sequence Length: 464 aa Download sequence

MEDGIVRRAK EEREEVKLGL GIGVGCNYGG QNGKKKKMKC GGGGGGGCGG GFTAAQLHEL  60
EEQALIYKHL AAGVPVPVQL LVPIWNSVAA SFGSSNAAAI YQHFPTFIGF NPVGGFDYRS  120
KMDPEPGRCR RTDGKKWRCS KSVVPGQKYC QQHMHRGCQR SRKHVETSET SSPSSAKQPK  180
NSDAELCSSK TNVQISTPNG LHLKAQSSDN IGVSQGTTTA SNGYQECKTN IRSVRTTSVA  240
MIPANRTATS PASAVTIAHA GPTAATNSSS NKNSISIGVK DYSSSHAGDN CMIRGSSLNR  300
NSTIVGSTIS PGLGFSPKSV LQGRQMTFLI SNGVCFNNSS GTELEPRRCR RTDGKKWRCR  360
RDVLPDQKYC GLHVHRGAKR QTKDSQPIGV PSSSAASMNT AQISQTISTT TKTDRAIPNT  420
NLSMSIPARP PPMQNDEKSN SSGDSDTTIT DTSLAAYEGS YVSS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G45480.1	1e-39	GRF family protein