PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP029536.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family NAC
Protein Properties Length: 309aa    MW: 35184.5 Da    PI: 6.6338
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP029536.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM53.76.9e-1771442128
          NAM   2 ppGfrFhPtdeelvveyLkkkvegkk...leleevikevdiykv.ePwdLpk....kvka..eekewyfFskrdkkyatgkrknr.atksgyWkatgk 88 
                  p+GfrF+P+d+e++ ++L   v +++   l  +++++  d+++  eP+++ +       +  +++ +yfF++ ++ + +g+  +r +   g W++   
  PCP029536.1   7 PVGFRFRPSDQEIIRFFLYTMVVKREplmLLYNNFVHVEDLFSDkEPREIWEdyggD--QlcDDEGLYFFCELKRLNLKGSYIHRkIGVGGSWSQGEP 102
                  89*******************9988877433334577779876549****7523432..14477899***************9994555999**9999 PP

          NAM  89 dkevlsk....kgelvglkktLvfykgrapkgektdWvmheyrl 128
                   k v+ k    +   +g k+ + + ++  ++ e+  W ++ey+l
  PCP029536.1 103 PKLVYYKdgngNAYPIGRKRKFRYENQ--QSEEHGGWHLDEYSL 144
                  999999965444444********9844..444699*******97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 309 aa     Download sequence    
MANPHAPVGF RFRPSDQEII RFFLYTMVVK REPLMLLYNN FVHVEDLFSD KEPREIWEDY  60
GGDQLCDDEG LYFFCELKRL NLKGSYIHRK IGVGGSWSQG EPPKLVYYKD GNGNAYPIGR  120
KRKFRYENQQ SEEHGGWHLD EYSLVGGGDG HEQNASENYY NASSSNYDSY FVICQLRKNE  180
RISSVILVKE CPESVPNPNV ARLPLRLKHA GEAPFLEAKK NLVFRSSGKN EVGRFLLEEN  240
APPPAMGGLK MALRAAATME EAGGFREVDE EEVFVEGSNT ARRLQRGEGQ KPVKCSSGRR  300
SQEVESRWA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G02230.12e-06NAC family protein