PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP029301.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family MYB_related
Protein Properties Length: 262aa    MW: 28666.8 Da    PI: 8.0639
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP029301.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding45.22.2e-145296347
                     SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                     +WT+eE++l++ + ++ G+g+W+ I+r + k+Rt+ q+ s+ qky
      PCP029301.1 52 PWTEEEHKLFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKY 96
                     8*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 262 aa     Download sequence    
MMYEQPQEAA SNNGNNGTAA GKDDAAPGYT SENDVVHNSG ANRERERKRG VPWTEEEHKL  60
FLLGLQKVGK GDWRGISRNF VKTRTPTQVA SHAQKYFLRR NNHNRRRRRS SLFDITTDTV  120
SPTPMDEEQV HLQDIASQSH PLPPPPLSDP RNASGFPMVP NFPMTVGPAV LPVPIENPTE  180
NLALRQANHE NSASAKLVRP VALHSAPHAT AMSDLNSTST TDTSTLTLNL SLSMDPREPS  240
SRHSAFQTMS GFSNGDGVIS VA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G70000.21e-41MYB_related family protein