PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP028454.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family ERF
Protein Properties Length: 184aa    MW: 19980.5 Da    PI: 5.0044
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP028454.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP252.41.3e-161059155
          AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                 ++y+G+r ++  g+Wv+eIr+p++   +kr++lg+f t+e+Aa+a++ a+++l+g
  PCP028454.1 10 PRYHGIR-CR-GGKWVSEIREPRK---TKRIWLGTFPTPEMAAAAYDVAALSLKG 59
                 689***9.55.7*********843...5************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 184 aa     Download sequence    
MASSSSGKHP RYHGIRCRGG KWVSEIREPR KTKRIWLGTF PTPEMAAAAY DVAALSLKGT  60
NIALNFPSFI GLYPVPPSTS AIDIRTAAAT AAAALRKNSD PMESPKMGQM QKHEGDDMMS  120
STCLASSVGG FIDEEELFQM PNLLVDMAEG MLVSPPRMND SPPSDYDDSP GNSDGGEDRL  180
WSYY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52020.15e-38ERF family protein