PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP028044.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

GRF

Protein Properties

Length: 395aa MW: 42784.5 Da PI: 8.4961

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP028044.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	78.9	4.8e-25	147	190	1	44
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkske 44 d+ep rCrRtDGKkWRCsr+v++g+k+CErH+hrgr+rsrk++e PCP028044.1 147 DPEPTRCRRTDGKKWRCSRDVVAGQKYCERHVHRGRNRSRKPVE 190 79***************************************997 PP
2	QLQ	53.2	9.1e-19	75	111	1	37
QLQ 1 saFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 s+F+ +Q+q+L+ Q+l+++y++a++ vPpeLlq+i+k PCP028044.1 75 SYFSLSQWQELELQALIFRYMVAGAAVPPELLQPIKK 111 78*********************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 395 aa Download sequence
MDFHLEQWRT QQHESEEQHS AKIPKLDLDP LQNAELPSAA GYALPLFVPE PNTKILSAAF 60 SESSPATSRF PKMGSYFSLS QWQELELQAL IFRYMVAGAA VPPELLQPIK KSLLHSAPYF 120 LHHPLQQFPH FQPALLQSGY WGRAAMDPEP TRCRRTDGKK WRCSRDVVAG QKYCERHVHR 180 GRNRSRKPVE VATTTTAATT TAGGGGSGTS LNNATTITNT SASGSHFALS GSSSSPSIDL 240 LHLNQSSSEA KPENRSLFEP RGEVSASAKS DSHVLRPFFD DWPGKLQELD NARSNASSMN 300 SATSLSISIR GTTSSDVSLK LSTGNGAEPG HQDSHADRGQ PQLNWPAGWA TNQMASMGGP 360 LAEALRSSSN SNSSPTSVLH RLPRGPASEA SFIST

Sequence ? help Back to Top

Protein Sequence Length: 395 aa Download sequence

MDFHLEQWRT QQHESEEQHS AKIPKLDLDP LQNAELPSAA GYALPLFVPE PNTKILSAAF  60
SESSPATSRF PKMGSYFSLS QWQELELQAL IFRYMVAGAA VPPELLQPIK KSLLHSAPYF  120
LHHPLQQFPH FQPALLQSGY WGRAAMDPEP TRCRRTDGKK WRCSRDVVAG QKYCERHVHR  180
GRNRSRKPVE VATTTTAATT TAGGGGSGTS LNNATTITNT SASGSHFALS GSSSSPSIDL  240
LHLNQSSSEA KPENRSLFEP RGEVSASAKS DSHVLRPFFD DWPGKLQELD NARSNASSMN  300
SATSLSISIR GTTSSDVSLK LSTGNGAEPG HQDSHADRGQ PQLNWPAGWA TNQMASMGGP  360
LAEALRSSSN SNSSPTSVLH RLPRGPASEA SFIST

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G52910.1	6e-86	GRF family protein