PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP027325.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family NAC
Protein Properties Length: 326aa    MW: 37875 Da    PI: 7.0388
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP027325.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM163.39.2e-51251502128
          NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk...k 96 
                   pGfrFhPtdeelv++yL++k+++k+++l e ik++diyk++PwdLp   +a++kewyfF+kr +ky+++ r+nr+t sg+Wkatg dk+++s+   +
  PCP027325.1  25 LPGFRFHPTDEELVDFYLRRKIQKKPISL-ELIKSIDIYKHDPWDLP---TAGDKEWYFFCKRGRKYKNSIRPNRVTGSGFWKATGIDKPIHSHggeG 118
                  59***************************.99***************...4589***************************************86544 PP

          NAM  97 gelvglkktLvfykgrapkgektdWvmheyrl 128
                  +  +glkktLv+y+g+a kg+ktdW+mhe+rl
  PCP027325.1 119 HDCIGLKKTLVYYRGSAGKGSKTDWMMHEFRL 150
                  455***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 326 aa     Download sequence    
MDSTYYSPSN KDDHQYTDDE DDVQLPGFRF HPTDEELVDF YLRRKIQKKP ISLELIKSID  60
IYKHDPWDLP TAGDKEWYFF CKRGRKYKNS IRPNRVTGSG FWKATGIDKP IHSHGGEGHD  120
CIGLKKTLVY YRGSAGKGSK TDWMMHEFRL PNPSSSNEYK NRSSNTKNMN TDPQQEAEIW  180
TLCRIFKRNV SYKKYTPDWR YLSAAKRHPT DTANSKNFAT NQQDHLDQSN TYISFGAPDI  240
CYEEKKPVVN HTNNTNNIIN GNHQLHPHAV GQLSSNMQQP ASTHPYMETF SNFSFQDLED  300
DLLNENWDEL RSVVQQLAFD PTAFLV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G12910.11e-82NAC family protein