PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP026766.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

MYB_related

Protein Properties

Length: 971aa MW: 106861 Da PI: 8.0974

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP026766.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	24.7	5.6e-08	543	591	3	48
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqkyl 48 +WT E +lv++v + G+g+W+ I r Rt ++k++w+++l PCP026766.1 543 AWTLGEVTKLVEGVSKCGTGRWSEIKRLSFasySYRTSVDLKDKWRNLL 591 7*************************9999999************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 971 aa Download sequence
METVVGVEGN DEGMCEESGV EKSSSSLSSP KQIADPVVYK LVRVEGNGRL VPATDDEVME 60 VEDFLVDETV ELPVVPDAGN VRCISNEESS SGKPQKENSE GLSHSENTEA DAKLNARLEN 120 AIALGSVSRL PLDPRTLKSF LRVSFKVFLD IQCSDQHDKL PAIDEKLQSE IHLQDIGPPL 180 SLSPDGSHIN ESGRIGECSK QPPDGPIESG SSACVICTSS KPDVNTLKGE ICLDNLSIRE 240 LHELFRATFG RETTVKDKLW LKRRITMGLT NSCDVSTTTF TIIDNKLVKK GKDDSIQNAD 300 GMLTEGSDGE AKNHGYETSP TSHSSQMENH HTVSGKRLGN SSVELDCGSE DLHTDQRAAK 360 RVRKPTKRYI EELSEVESKD CSPKVISPVK NAGQGQTSVK SCRPLGNVPL NEKATVNRLD 420 PLGNVTNVPS NERTYVTRFD SLGGSGVQVP YVSRVRRSRP RKNIMALMKF DMSVMGVTAK 480 LVKEAFSFTA EPEKDKRRSV MGTIEPDKNM GMKKTDSSED NSDDGSAQIP TAKGGMRRKH 540 HRAWTLGEVT KLVEGVSKCG TGRWSEIKRL SFASYSYRTS VDLKDKWRNL LKASFAQTPP 600 DEGLAKLMFG VYKLPETCFS THPAINLLKV RQLAEMHAQL KAKIAKLRTQ LLEPPKGSSG 660 GGDGFEVTKF GHGRVALIGF PSVGKSTLLT MLTGTHSEAA SYEFTTLTCI PGIIHYNDTK 720 IQLLDLPGII EGASEGKGRG RQVIAVAKSS DIVLMVLDAS KSEGHRQILT KELEAVGLRL 780 NKKPPQIYFK KKKTGGISFN STLTLTHVDE KLCYQILHEY KIHNAELLFR EDATVDDLID 840 VIEGNRKYMK LLAKMWEEMG LVRVYTKPQG QQPDFGDPVV LSADRGGCSV GDFCNHIHRS 900 LVKEVKYVLV WGTSARHYPQ HCGLGHVLND EDVVQIVKKK DKEGEGRGRF KSHSTDPARI 960 SDRVKKAPLK Q

Sequence ? help Back to Top

Protein Sequence Length: 971 aa Download sequence

METVVGVEGN DEGMCEESGV EKSSSSLSSP KQIADPVVYK LVRVEGNGRL VPATDDEVME  60
VEDFLVDETV ELPVVPDAGN VRCISNEESS SGKPQKENSE GLSHSENTEA DAKLNARLEN  120
AIALGSVSRL PLDPRTLKSF LRVSFKVFLD IQCSDQHDKL PAIDEKLQSE IHLQDIGPPL  180
SLSPDGSHIN ESGRIGECSK QPPDGPIESG SSACVICTSS KPDVNTLKGE ICLDNLSIRE  240
LHELFRATFG RETTVKDKLW LKRRITMGLT NSCDVSTTTF TIIDNKLVKK GKDDSIQNAD  300
GMLTEGSDGE AKNHGYETSP TSHSSQMENH HTVSGKRLGN SSVELDCGSE DLHTDQRAAK  360
RVRKPTKRYI EELSEVESKD CSPKVISPVK NAGQGQTSVK SCRPLGNVPL NEKATVNRLD  420
PLGNVTNVPS NERTYVTRFD SLGGSGVQVP YVSRVRRSRP RKNIMALMKF DMSVMGVTAK  480
LVKEAFSFTA EPEKDKRRSV MGTIEPDKNM GMKKTDSSED NSDDGSAQIP TAKGGMRRKH  540
HRAWTLGEVT KLVEGVSKCG TGRWSEIKRL SFASYSYRTS VDLKDKWRNL LKASFAQTPP  600
DEGLAKLMFG VYKLPETCFS THPAINLLKV RQLAEMHAQL KAKIAKLRTQ LLEPPKGSSG  660
GGDGFEVTKF GHGRVALIGF PSVGKSTLLT MLTGTHSEAA SYEFTTLTCI PGIIHYNDTK  720
IQLLDLPGII EGASEGKGRG RQVIAVAKSS DIVLMVLDAS KSEGHRQILT KELEAVGLRL  780
NKKPPQIYFK KKKTGGISFN STLTLTHVDE KLCYQILHEY KIHNAELLFR EDATVDDLID  840
VIEGNRKYMK LLAKMWEEMG LVRVYTKPQG QQPDFGDPVV LSADRGGCSV GDFCNHIHRS  900
LVKEVKYVLV WGTSARHYPQ HCGLGHVLND EDVVQIVKKK DKEGEGRGRF KSHSTDPARI  960
SDRVKKAPLK Q

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	456	462	RRSRPRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72650.1	9e-96	MYB_related family protein