PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP026673.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

C2H2

Protein Properties

Length: 698aa MW: 78566.3 Da PI: 6.61

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP026673.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	11.4	0.00099	24	43	1	20
EEETTTTEEESSHHHHHHHH CS zf-C2H2 1 ykCpdCgksFsrksnLkrHi 20 ++C++Cgk+ s + Lk Hi PCP026673.1 24 FQCNYCGKVVSGSTRLKYHI 43 89***************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 698 aa Download sequence
MDAGGSGTIN VHDHGTVFYS KNKFQCNYCG KVVSGSTRLK YHIGGIRGDV LPCNSAPADV 60 RELVKNNVIE RKRETFGKEF GELNSSDLSR KRNCKRGASQ NAGFQNRSQE VLELECEDSG 120 AVHVSVTKRG RGAQRGDNGE TKRDIISRQV QKCIGRFFYE TGLEFVGVNS SSFERMIRSA 180 LGTGQLGYKI PTCDELRGWI LDEEVKEMQE YVTKIRDSWA TTGCSILLDG WTDEKGRSLV 240 NFLVNCPQGP IYLCTHDISS IVGDIDAIYM VLEGVIKDVG IENVIQVVAD TTTGWAGTMQ 300 KEFSSRCKDV FWTVSASHCI ALILENIGMI GSTRDIFDKA KVMTKFIHGH EAVLKLLRKH 360 TLGHDLIKPS KIRSAMPFMT LENIVSKKQN LKDMFSSPEW NMSTWASRVE GKRVADLVEG 420 RSFWTGAGMV LNAAMPLIGI LNWIFEADEP LIGYIYETMD QVKETIKEEF NKKKPDYMPI 480 WEVVDEIWNN VLHSPLHAAG YYLNPSLFYS SDFYPDFEVS SGLLSCLGQL VQSQPIKDLI 540 IRQLGEYAHG KGSYQEGSSR TRRRNVPPAM WWSSYGENHP ELQRFAVRIL SQNCDGALRY 600 GLKRTMAEKL LTNGRNPVEQ QRLKYLTSVH YNLQLQQFHA GMKSGVEAEE IDPMDDWIVD 660 EAPDVVSQNL ESSWMNLDCA RALSEEGCSR FAAKTETM

Sequence ? help Back to Top

Protein Sequence Length: 698 aa Download sequence

MDAGGSGTIN VHDHGTVFYS KNKFQCNYCG KVVSGSTRLK YHIGGIRGDV LPCNSAPADV  60
RELVKNNVIE RKRETFGKEF GELNSSDLSR KRNCKRGASQ NAGFQNRSQE VLELECEDSG  120
AVHVSVTKRG RGAQRGDNGE TKRDIISRQV QKCIGRFFYE TGLEFVGVNS SSFERMIRSA  180
LGTGQLGYKI PTCDELRGWI LDEEVKEMQE YVTKIRDSWA TTGCSILLDG WTDEKGRSLV  240
NFLVNCPQGP IYLCTHDISS IVGDIDAIYM VLEGVIKDVG IENVIQVVAD TTTGWAGTMQ  300
KEFSSRCKDV FWTVSASHCI ALILENIGMI GSTRDIFDKA KVMTKFIHGH EAVLKLLRKH  360
TLGHDLIKPS KIRSAMPFMT LENIVSKKQN LKDMFSSPEW NMSTWASRVE GKRVADLVEG  420
RSFWTGAGMV LNAAMPLIGI LNWIFEADEP LIGYIYETMD QVKETIKEEF NKKKPDYMPI  480
WEVVDEIWNN VLHSPLHAAG YYLNPSLFYS SDFYPDFEVS SGLLSCLGQL VQSQPIKDLI  540
IRQLGEYAHG KGSYQEGSSR TRRRNVPPAM WWSSYGENHP ELQRFAVRIL SQNCDGALRY  600
GLKRTMAEKL LTNGRNPVEQ QRLKYLTSVH YNLQLQQFHA GMKSGVEAEE IDPMDDWIVD  660
EAPDVVSQNL ESSWMNLDCA RALSEEGCSR FAAKTETM