PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP026630.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family ERF
Protein Properties Length: 416aa    MW: 46126.6 Da    PI: 4.2455
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP026630.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.95.8e-194796255
          AP2  2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                 ++ GVr+++ +grWvAeI+d      ++ r++lg+f+taeeAa+a+++a+  l+g
  PCP026630.1 47 RFVGVRQRP-SGRWVAEIKDtI----QKIRVWLGTFDTAEEAARAYDEAACLLRG 96
                 789******.7*********33....35**********************99998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 416 aa     Download sequence    
MARKRKVSEG VEENTTTSGV GTMAWDEMVK EASAVAELGG ARRARKRFVG VRQRPSGRWV  60
AEIKDTIQKI RVWLGTFDTA EEAARAYDEA ACLLRGANTR TNFWPCSQSQ STTPALPSKI  120
TNLLLQRLKA RNNAISCFPP SAPLPINHHY DQNQAIETDF SETQYTDFLN DPEDYYITSN  180
NNQEIITDHI SASSIDHMTS SFESCLTDKE TDHMEYGNLS EVAQQTYSGE DANFAAEGSE  240
EDVDQEQEEE EEVNGDQVGV IDFQFVDDIG ASNSNYYSPS PFEIAEEIEE PAPEADSYAD  300
EPSMLRAAMK RMKYERKFSA SLYAFNGILE CLKLRIGSGN GKGRGVSECL SNLQRACSNK  360
NKEEEVVTVA AAEHPPNDSK QEEQGSSSMD VSLSSDGELS LWSSLDLQPI CFLSTN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.17e-22ERF family protein