PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP026279.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family ERF
Protein Properties Length: 321aa    MW: 35624.6 Da    PI: 7.3686
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP026279.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.83.2e-19154204255
          AP2   2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 
                  +y+GVr+++ +g+++AeIrdp   + +  r++lg+f+ta eAaka++ a+ kl+g
  PCP026279.1 154 HYRGVRRRP-WGKYAAEIRDP---NrRGSRVWLGTFDTAIEAAKAYDFAAFKLRG 204
                  7********.**********9...4334*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 321 aa     Download sequence    
MASEDSSALE LIRQHLLNEF TTVDSFITSL NLCTSHIPQQ HEITQSPFNT ASSSSPSSSS  60
SSTITTSTTN SGSESTDQYF KISDYLVPEI DRDTRFETKP QISHPKPPKH STLSHRKPAI  120
NVAIPSPPPL SSSSGDENQN TSNTSTVVEA AARHYRGVRR RPWGKYAAEI RDPNRRGSRV  180
WLGTFDTAIE AAKAYDFAAF KLRGSKAILN FPLEAGRSEE LSADHPLLVS RKRRRERSTE  240
SHESSGEMIR NKEIKKEEDV QDIKIPAQER VSTAVCPLTP SSWTAVWDLS KENELGIFSV  300
PPLSPLSPHP NFMGYSQLMV T
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1231235RKRRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51190.18e-53ERF family protein