PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP026078.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

MYB_related

Protein Properties

Length: 689aa MW: 77911.6 Da PI: 4.3393

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP026078.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	23.9	1e-07	426	474	2	47
SSS-HHHHHHHHHHH....HHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdav....kqlGggtWktIartmgkgRtlkqcksrwqky 47 + W++eE++l+ ++v + lG++ W++ + ++ Rt k+++s+++++ PCP026078.1 426 QTWSEEEEQLFHRVVfstpTSLGKNFWDKLSTVFP-SRTKKEIVSYYFNV 474 79***********5555667777******.*********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 689 aa Download sequence
MKFLTWTVDI PVDISKLVNL QRLILAHNLI DRLPINLAKL VSLKVMTLDG NRVTTLPDEL 60 GQLVRLEQLS ISGNALESLP ETIGSLRNLK LLNLSKNKLK SLPESIGSCF SLEELQANDN 120 SIEELPESVC NLTHVKSLCL DNNSVKQIPT NLLKDCKALQ NISLHGNPIS MDQFQQFNMV 180 QKRSLDDEEI FVSFKHPRQV GHNKELVSFS ESVFPGDVSQ EPETLENGCA KDKNRSEEEI 240 SDDKFSGLPK GSEDVETSAS RSFTISSWAT SSTSGEDSLF EALFHGSFFP EYFNHERSIR 300 TLTQFEDIYS VLLDHPPRKS ASIGPEHQAD VPLWGAQGAP NNFDLEDEKR LMGTCVIPMP 360 DSDTELFTDT GCIVGKGRID CSCEDGESVR CVRQHILEAR EKLVKTIGPK RFEELGFNDM 420 GEQVTQTWSE EEEQLFHRVV FSTPTSLGKN FWDKLSTVFP SRTKKEIVSY YFNVFMLRKR 480 AEQNRYDPMN IDSDNDEWQG SNDYGDNQPS VTEDEDSVVE SPEGRRVPGY NRNWKDDLEV 540 FDEDDTDETC DDNVDVDMFG RGPEQILDRC YGLVDNCSSC PIPQLQDKIS WDEKVDQEVQ 600 DDSCTSVDAA VAASQESQRK PEDGNHWSGS FNRGDHEYVL EPCDAKIWDA GYMTFPKNKV 660 DFLPTSNMIE EVFGKESWNY KARDGKNLG

Sequence ? help Back to Top

Protein Sequence Length: 689 aa Download sequence

MKFLTWTVDI PVDISKLVNL QRLILAHNLI DRLPINLAKL VSLKVMTLDG NRVTTLPDEL  60
GQLVRLEQLS ISGNALESLP ETIGSLRNLK LLNLSKNKLK SLPESIGSCF SLEELQANDN  120
SIEELPESVC NLTHVKSLCL DNNSVKQIPT NLLKDCKALQ NISLHGNPIS MDQFQQFNMV  180
QKRSLDDEEI FVSFKHPRQV GHNKELVSFS ESVFPGDVSQ EPETLENGCA KDKNRSEEEI  240
SDDKFSGLPK GSEDVETSAS RSFTISSWAT SSTSGEDSLF EALFHGSFFP EYFNHERSIR  300
TLTQFEDIYS VLLDHPPRKS ASIGPEHQAD VPLWGAQGAP NNFDLEDEKR LMGTCVIPMP  360
DSDTELFTDT GCIVGKGRID CSCEDGESVR CVRQHILEAR EKLVKTIGPK RFEELGFNDM  420
GEQVTQTWSE EEEQLFHRVV FSTPTSLGKN FWDKLSTVFP SRTKKEIVSY YFNVFMLRKR  480
AEQNRYDPMN IDSDNDEWQG SNDYGDNQPS VTEDEDSVVE SPEGRRVPGY NRNWKDDLEV  540
FDEDDTDETC DDNVDVDMFG RGPEQILDRC YGLVDNCSSC PIPQLQDKIS WDEKVDQEVQ  600
DDSCTSVDAA VAASQESQRK PEDGNHWSGS FNRGDHEYVL EPCDAKIWDA GYMTFPKNKV  660
DFLPTSNMIE EVFGKESWNY KARDGKNLG