PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP025988.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family WRKY
Protein Properties Length: 321aa    MW: 34898.4 Da    PI: 6.2832
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP025988.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY102.23.1e-32166223259
                  --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
         WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                  +Dgy+WrKYGqK vk+s+fprsYYrCt ++C+vkk+vers++dp++v++tYeg+H h+
  PCP025988.1 166 EDGYRWRKYGQKAVKNSPFPRSYYRCTNTKCTVKKRVERSSQDPTTVITTYEGQHCHH 223
                  8******************************************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 321 aa     Download sequence    
MDDDNEKRHP LTTTEFTTQS TWTPDSDSAY FFNTHDRDNN ILSEFGWIFN PDASKPDDCF  60
PCLDPIAAAA DTSDLAGTTS SGPLVLENNS SSSAAFGSPD PAPVVGSAST NPSASTSSSE  120
DPPERSTGSG GKPPPEIPSK VKMKGPKRIR QPRFAFITKS EVDHLEDGYR WRKYGQKAVK  180
NSPFPRSYYR CTNTKCTVKK RVERSSQDPT TVITTYEGQH CHHTVAFPRG GVIGHESGFA  240
GHQLGQLPPA SQFMYYPTIR PREITSPINL TPTSSHQVVV PRHDDDQAAG GSSHSTDPQL  300
TPPLPTDEGL LGDIVPPGMR N
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69310.24e-64WRKY family protein