PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP025219.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family ERF
Protein Properties Length: 398aa    MW: 42711.2 Da    PI: 6.1826
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP025219.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.31.1e-19197246255
          AP2   2 gykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                  +y+GVr+++ +g+W+AeIrd +     + +r++lg+f tae Aa+a+++a+++++g
  PCP025219.1 197 RYRGVRQRP-WGKWAAEIRDpF-----KaARVWLGTFETAEAAAQAYDQAALRFRG 246
                  7********.**********66.....56*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 398 aa     Download sequence    
MCVLKVANSR GNSDQRAARR TNIEEGQGGH HNIGEWLNEP LLISHQQRQR AGGGGSGILA  60
SAASSMLLQL DWEREMSAMV SALTHVVAGD ENEVAAAGVN SDSRTSSWGS VGTKRGREEE  120
EEEEGGGGGG GPLSESVTRL CRAFDEFPQH IQGPSSAFGE GLSTRTTTTA IPPTPSPTPS  180
SRYVYSAPEI AEPIRRRYRG VRQRPWGKWA AEIRDPFKAA RVWLGTFETA EAAAQAYDQA  240
ALRFRGNKAK LNFPENVRLL SSTAAPPPTQ LSNSAPQYTL LSVATSCEPI VHSQAFHSSD  300
EVPSTSRNLV SYSELVDMQR QPMSLYDQMV LSSSAVAEAA ASSSSSSSSL SPPPLSSLFG  360
ARSWLPVGPS VSDNSTSTVD FPMQQWSSYA QYTTPSSR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G50080.12e-28ERF family protein