PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP024952.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

NAC

Protein Properties

Length: 296aa MW: 33865 Da PI: 7.4566

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP024952.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	169	1.5e-52	8	132	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkge 98 lppGfrFhPtdeelv++yL++k++++++++ +i+e+d+yk++Pw+Lp + +ekewyfFs+rd+ky++g+r+nra+ sgyWkatg dk++ + + PCP024952.1 8 LPPGFRFHPTDEELVKHYLCRKCASQSISV-PIIAEIDLYKYDPWELPGLALYGEKEWYFFSPRDRKYPNGSRPNRAAGSGYWKATGADKPIGH--PK 102 79**************************.88***********6555679*********************************99..78 PP NAM 99 lvglkktLvfykgrapkgektdWvmheyrl 128 vg+kk Lvfy g+ap+gekt+W+mheyrl PCP024952.1 103 PVGIKKALVFYAGKAPRGEKTNWIMHEYRL 132 9*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 296 aa Download sequence
MSSADLQLPP GFRFHPTDEE LVKHYLCRKC ASQSISVPII AEIDLYKYDP WELPGLALYG 60 EKEWYFFSPR DRKYPNGSRP NRAAGSGYWK ATGADKPIGH PKPVGIKKAL VFYAGKAPRG 120 EKTNWIMHEY RLADVDRSPR KKNSLRLDDW VLCRIYNKKG TVENQQPQQQ QEQQRTASRN 180 ASSGSEFEDR KPDNLRCPPP PASVVPSRHG SDYVYFDNSD SVPKLHTDSS CSEQVVSPEL 240 ACEVQSEPKW KEWEKALEIP YSYMDTTVEN GFGAQFQSGN EMSPLQDIFM YLQKPY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G01720.1	1e-150	NAC family protein