PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP024640.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

bHLH

Protein Properties

Length: 502aa MW: 55950.3 Da PI: 6.7381

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP024640.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	37	6e-12	356	402	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 +h e+Er+RR+++N++f Lr ++P+ + K++Ka+ L A+ +I +Lq PCP024640.1 356 NHVEAERQRREKLNQRFYALRAVVPNiS------KMDKASLLGDAITHITDLQ 402 799*********************66......***************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 502 aa Download sequence
MGEKFWVNEE DKVMVESVLG TEACRFLISL ASENVLSDLI RPSGKLGVQQ GLCQLVNGSN 60 WNYAIFWQAV GSKSGGSALC WGDGHCRDTK DGGAGNVNSS RDSSLEAVQN KEEVKKRVVQ 120 KLHACFGGLN ADNYARRLDG VSDVEMFYLT SMCYAFQLDS ISHCGPAEAY NSRKSIWVSD 180 AGSCLHHYQS RSFLARLARF QTVVFVPMKS GVVELGSVKS TPEEQSYVDM VRSAFGESSP 240 IQPKAFPMIF GRELSLGGPK SQSVNISFTP KIEEDFAFPP ESLELQSVGT SNGFPSEGGE 300 VKLFPQMNQM MVDGFNTQTR VSSSELLKDE SSTQVDEQKP RKRGRKPSNG REEPLNHVEA 360 ERQRREKLNQ RFYALRAVVP NISKMDKASL LGDAITHITD LQMKIRIIET EKQMVNNKGK 420 QLPVPEIDFQ ERHEDAVVRM NFPLDSHPVS DVIRTLREHK IVPQESNVSI TDNDKVIHTF 480 SIQTQGGDAE KLKEKLVAYL SK

Sequence ? help Back to Top

Protein Sequence Length: 502 aa Download sequence

MGEKFWVNEE DKVMVESVLG TEACRFLISL ASENVLSDLI RPSGKLGVQQ GLCQLVNGSN  60
WNYAIFWQAV GSKSGGSALC WGDGHCRDTK DGGAGNVNSS RDSSLEAVQN KEEVKKRVVQ  120
KLHACFGGLN ADNYARRLDG VSDVEMFYLT SMCYAFQLDS ISHCGPAEAY NSRKSIWVSD  180
AGSCLHHYQS RSFLARLARF QTVVFVPMKS GVVELGSVKS TPEEQSYVDM VRSAFGESSP  240
IQPKAFPMIF GRELSLGGPK SQSVNISFTP KIEEDFAFPP ESLELQSVGT SNGFPSEGGE  300
VKLFPQMNQM MVDGFNTQTR VSSSELLKDE SSTQVDEQKP RKRGRKPSNG REEPLNHVEA  360
ERQRREKLNQ RFYALRAVVP NISKMDKASL LGDAITHITD LQMKIRIIET EKQMVNNKGK  420
QLPVPEIDFQ ERHEDAVVRM NFPLDSHPVS DVIRTLREHK IVPQESNVSI TDNDKVIHTF  480
SIQTQGGDAE KLKEKLVAYL SK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G16430.1	1e-175	bHLH family protein