PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP024584.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

WRKY

Protein Properties

Length: 453aa MW: 49516.1 Da PI: 7.5221

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP024584.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	94.6	7.2e-30	203	262	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 ++Dg++WrKYGqK+ kg+++pr+YYrCt a Cpv+k+v+r+ ed +++++tYeg+Hnh+ PCP024584.1 203 MNDGCQWRKYGQKTAKGNPCPRAYYRCTVApACPVRKQVQRCYEDMSILITTYEGTHNHS 262 58*************************99**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 453 aa Download sequence
MPNSNSRSSA EKKVDQSVGY QEVHSRVLRK ESELDNAKAE MGEVREENAR LKMTLNHMEK 60 DYQSLQLRFF DILRQDASKK AVHVAGDRII EEPEQLVSLC LGRSPREPTS DRETTTSSNF 120 TKLVQVDDGE DNLKANLTLG LGSNETSLEE PNKDRAEAGS GDASSSLSKT PKTMRNEDGE 180 PPTLVNAKRA RVSVRTRCDT PTMNDGCQWR KYGQKTAKGN PCPRAYYRCT VAPACPVRKQ 240 VQRCYEDMSI LITTYEGTHN HSLPFTATYL ASTTSAAASM LLSGSSTSQP GFGSTSTLLN 300 GSEFSAFDNS RTQLYMPKSS HPLLPTITLD LTASPPSSST FPSSLSFCSP SDSNIFPTRW 360 DNGYLKHGLP PFDKAQVGSF NLGKPLQEYF HQNYAEKIHQ ASSQVSMTES LTKAITSDPN 420 FKSVVAVALS SLVGSGGGAT HRNQGEGGER INT

Sequence ? help Back to Top

Protein Sequence Length: 453 aa Download sequence

MPNSNSRSSA EKKVDQSVGY QEVHSRVLRK ESELDNAKAE MGEVREENAR LKMTLNHMEK  60
DYQSLQLRFF DILRQDASKK AVHVAGDRII EEPEQLVSLC LGRSPREPTS DRETTTSSNF  120
TKLVQVDDGE DNLKANLTLG LGSNETSLEE PNKDRAEAGS GDASSSLSKT PKTMRNEDGE  180
PPTLVNAKRA RVSVRTRCDT PTMNDGCQWR KYGQKTAKGN PCPRAYYRCT VAPACPVRKQ  240
VQRCYEDMSI LITTYEGTHN HSLPFTATYL ASTTSAAASM LLSGSSTSQP GFGSTSTLLN  300
GSEFSAFDNS RTQLYMPKSS HPLLPTITLD LTASPPSSST FPSSLSFCSP SDSNIFPTRW  360
DNGYLKHGLP PFDKAQVGSF NLGKPLQEYF HQNYAEKIHQ ASSQVSMTES LTKAITSDPN  420
FKSVVAVALS SLVGSGGGAT HRNQGEGGER INT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G15130.1	2e-82	WRKY family protein