PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP024311.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

ERF

Protein Properties

Length: 496aa MW: 56125.7 Da PI: 4.7955

Description

ERF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP024311.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	53.2	7.1e-17	70	130	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpse..ng.....krkrfslgkfgtaeeAakaaiaarkkleg 55 + ++GVr++ +g+WvAeIr+p g k+ r +lg+f ta+eAa a+++a+++++g PCP024311.1 70 CVFRGVRQRT-WGKWVAEIREPIRarAGsvpkkKNMRLWLGTFPTAYEAALAYDKAARAMYG 130 689**999.******655564487555************************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 496 aa Download sequence
MESEASGGER KLRKRRNGCD SIEDTLAKWK NYNERLDFGK DVGKKTRRSP AKGSRKGCMR 60 GKGGPENSDC VFRGVRQRTW GKWVAEIREP IRARAGSVPK KKNMRLWLGT FPTAYEAALA 120 YDKAARAMYG ALARLNFPDN AVDSKDYYSN SVSSKTPSSH ESSSTYNNAD EAEGRSAFFE 180 DCVAKEQKQE TDCSVSEELH VLRATSREPK AVKCEYETER ELVKNDDVFQ TGSYGSFDHR 240 GDYLPNEPPV VNFDSVFDQK PCNDWDPLEI FLRSNYDYLT EVVDGECNRR NSCKPSNDVK 300 VETPAMREAA EKPFPVILES GSHNGLDEKY NYMHGEQINA AENLLTNFEP SEDVEMKLSM 360 TDQELQGGFA ETTRLNGHNH DGFVHSYACL DDLDVAYSPI YGINPWNDIG IQKELDDRLD 420 YVHNWSAEET YGIDAAEDQQ WGRTHNLPTQ LQIQPHLDIP GSSNHAEYAR LGVDFDSVLF 480 RQSYDSGEME DQGPPK

Sequence ? help Back to Top

Protein Sequence Length: 496 aa Download sequence

MESEASGGER KLRKRRNGCD SIEDTLAKWK NYNERLDFGK DVGKKTRRSP AKGSRKGCMR  60
GKGGPENSDC VFRGVRQRTW GKWVAEIREP IRARAGSVPK KKNMRLWLGT FPTAYEAALA  120
YDKAARAMYG ALARLNFPDN AVDSKDYYSN SVSSKTPSSH ESSSTYNNAD EAEGRSAFFE  180
DCVAKEQKQE TDCSVSEELH VLRATSREPK AVKCEYETER ELVKNDDVFQ TGSYGSFDHR  240
GDYLPNEPPV VNFDSVFDQK PCNDWDPLEI FLRSNYDYLT EVVDGECNRR NSCKPSNDVK  300
VETPAMREAA EKPFPVILES GSHNGLDEKY NYMHGEQINA AENLLTNFEP SEDVEMKLSM  360
TDQELQGGFA ETTRLNGHNH DGFVHSYACL DDLDVAYSPI YGINPWNDIG IQKELDDRLD  420
YVHNWSAEET YGIDAAEDQQ WGRTHNLPTQ LQIQPHLDIP GSSNHAEYAR LGVDFDSVLF  480
RQSYDSGEME DQGPPK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38340.1	3e-28	ERF family protein