PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP023784.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family NAC
Protein Properties Length: 240aa    MW: 26740.8 Da    PI: 6.2505
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP023784.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM40.68.1e-13101453118
          NAM   3 pGfrFhPtdeelvveyLkkkvegkk.....leleevikevdiy..kvePwdLpk........kvka.eekewyfFskrdkkyatgkrknratk..sgy 82 
                   +frF+Ptd+el+ ++L+  + +++      + ++++++++++  ++eP+++ +        +++a ++  +yfFs+  kk+++g++  r++    g 
  PCP023784.1  10 SCFRFKPTDQELIGRFLRYFLVETPqllppSPHHTFMHKCNLFgnHSEPSEIWEafgggralQLAApDQPALYFFSELTKKTPNGSNIVRKMGrnGGK 107
                  58*****************99988889887555567****98622679****74467887664444344588**************999964434899 PP

          NAM  83 Wkatgkdkevlsk..kgelvglkktLvfykgrapkgek 118
                  W  +     v  +  +++ +glk+t+ + + ++++ +k
  PCP023784.1 108 WDGKAVPAWVEGTdgTSTCIGLKRTFCYKNTSDNNNRK 145
                  *988888888776545566*********9887777666 PP
Sequence ? help Back to Top
Protein Sequence    Length: 240 aa     Download sequence    
MEINHSLVLS CFRFKPTDQE LIGRFLRYFL VETPQLLPPS PHHTFMHKCN LFGNHSEPSE  60
IWEAFGGGRA LQLAAPDQPA LYFFSELTKK TPNGSNIVRK MGRNGGKWDG KAVPAWVEGT  120
DGTSTCIGLK RTFCYKNTSD NNNRKCPRTS SSEDDQVTAS TKNSINKRKC PTSSSSEDQA  180
TTSNKRTKKK SANEEIEGDN DQELLLPADS GIAADGAVEE NVWDPSLLEK YLLETHEENL