PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP022841.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

MYB_related

Protein Properties

Length: 912aa MW: 100672 Da PI: 5.6572

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP022841.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	39.1	1.7e-12	745	789	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT+eE+ +++ + ++G+g+W+ I+r ++t+ q+ s+ qky PCP022841.1 745 PWTQEEHRRFLMGLLKYGKGDWRNISRNYVVTKTPTQVASHAQKY 789 7***************************9***********9 PP

Sequence ? help Back to Top
Protein Sequence Length: 912 aa Download sequence
MEATIACCSS ARALLPATGV STHQHSTSVV APSFSSKGLK SSSLFGESLR QVPRSSLKFS 60 RTKQSSHVTK CEIGDSLEEF LAKATPDKGL IRLLLSMGEA LRTISFKVRT ASCGGTACIN 120 SFGDEQLAVD MLADKLLFEA LSYSHVCKYA CSEEVPELQD MGGPVEGGFS VAFDPLDGSS 180 IVDTNFTVGT IFGVWPGDKL TGVTGRDQVA AAMGIYGPRT TYVLAIKGFP GTHEFLLLDE 240 GKWQHVKETT EIGEGKMFSP GNLRATFDNP DYDKLISYYV KEKYTLRYTG GMVPDVNQII 300 VKEKGVFTNV ISPTTKAKLR LLFEVAPLGL LIENAGGYSS DGQQSVLDKV VVNLDERTQV 360 AYGSKNEIIR FEETLYGSSR LKELKVLDFF LQASEARTAK WRGTVGGIVE APIDKVWSMV 420 SQTKRLAEWM PMVERCTDLA GEEDVPGYVR LVSGFMFPQD DGDSNVGLDG SVNSLKLVDY 480 GDESTLVDWS FEVNPVEGAC EDSTVDYLGF LYKSCIKRVE AALEAASKKV VFKSTTNLCS 540 SKHIVTINGK FPGPAPYARE DYTVIAKVTN HVNQCHNPLS GLPPNVSDAH TISGHAGPFP 600 GCSSQGTEMG GYTIHVESGK TYLLRIVNAA LNDDLFFKES QGSEWTKEEN KMFESALAMF 660 DEKSPDRFQR VAEMIPGKTV IDVMKQYQEL EEDVCEIESG RFPIPPGYPQ SYFRLELGDD 720 RDFDANRKRP LAARGSEQER RKGIPWTQEE HRRFLMGLLK YGKGDWRNIS RNYVVTKTPT 780 QVASHAQKYF MRQHSGGKDK RRPSIHDITT VNLTSDAQSE TNMPPSDQFL PEQKSTESLN 840 VLLDWNAADD EGAAMGFDST HGNLFDPSPY DVDADGIKMQ LQKLYSRAHY AAHATPQNSL 900 YLMQSARHQI HG

Sequence ? help Back to Top

Protein Sequence Length: 912 aa Download sequence

MEATIACCSS ARALLPATGV STHQHSTSVV APSFSSKGLK SSSLFGESLR QVPRSSLKFS  60
RTKQSSHVTK CEIGDSLEEF LAKATPDKGL IRLLLSMGEA LRTISFKVRT ASCGGTACIN  120
SFGDEQLAVD MLADKLLFEA LSYSHVCKYA CSEEVPELQD MGGPVEGGFS VAFDPLDGSS  180
IVDTNFTVGT IFGVWPGDKL TGVTGRDQVA AAMGIYGPRT TYVLAIKGFP GTHEFLLLDE  240
GKWQHVKETT EIGEGKMFSP GNLRATFDNP DYDKLISYYV KEKYTLRYTG GMVPDVNQII  300
VKEKGVFTNV ISPTTKAKLR LLFEVAPLGL LIENAGGYSS DGQQSVLDKV VVNLDERTQV  360
AYGSKNEIIR FEETLYGSSR LKELKVLDFF LQASEARTAK WRGTVGGIVE APIDKVWSMV  420
SQTKRLAEWM PMVERCTDLA GEEDVPGYVR LVSGFMFPQD DGDSNVGLDG SVNSLKLVDY  480
GDESTLVDWS FEVNPVEGAC EDSTVDYLGF LYKSCIKRVE AALEAASKKV VFKSTTNLCS  540
SKHIVTINGK FPGPAPYARE DYTVIAKVTN HVNQCHNPLS GLPPNVSDAH TISGHAGPFP  600
GCSSQGTEMG GYTIHVESGK TYLLRIVNAA LNDDLFFKES QGSEWTKEEN KMFESALAMF  660
DEKSPDRFQR VAEMIPGKTV IDVMKQYQEL EEDVCEIESG RFPIPPGYPQ SYFRLELGDD  720
RDFDANRKRP LAARGSEQER RKGIPWTQEE HRRFLMGLLK YGKGDWRNIS RNYVVTKTPT  780
QVASHAQKYF MRQHSGGKDK RRPSIHDITT VNLTSDAQSE TNMPPSDQFL PEQKSTESLN  840
VLLDWNAADD EGAAMGFDST HGNLFDPSPY DVDADGIKMQ LQKLYSRAHY AAHATPQNSL  900
YLMQSARHQI HG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G11280.1	1e-80	MYB family protein