PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP022602.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family ERF
Protein Properties Length: 287aa    MW: 30570.9 Da    PI: 6.5105
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP022602.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.44.1e-1970119255
          AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                   ykGVr++  +g+WvAeIr+p   + r +r +lg+f+t +eAa a++aa++kl+g
  PCP022602.1  70 AYKGVRQRT-WGKWVAEIREP---N-RgARLWLGTFDTSYEAALAYDAAARKLYG 119
                  59****999.**********8...3.35************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 287 aa     Download sequence    
MSTMEMSGGN SSAGVAEMSG GNSSAGVAEM SGGSSSVGVA EKKLAKRPAQ GSSRKGCMRG  60
KGGPENAMCA YKGVRQRTWG KWVAEIREPN RGARLWLGTF DTSYEAALAY DAAARKLYGS  120
EAKLNLPDQQ APNYHHYQLN QHLQHQVFPS SANPGVPPQI PNQTLVQNNP SGTGTNPACY  180
AAPVIHNNFP NVKVDQPLGN YNSGGAETLP EQGGMKVENN MSSGVTNEGI DRIFWGNMSE  240
SFPVFDDSIW TEAAMSLDLP GVADQGIFGC GSVDGNFWEH RIRLNGA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75490.11e-42ERF family protein