PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP022207.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

GRF

Protein Properties

Length: 326aa MW: 36320.7 Da PI: 8.3828

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP022207.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	72.8	3.8e-23	74	118	1	45
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 d+epgrCrRtDGKkWRCs+++ +++k+CErH++rgr rsrk +e+ PCP022207.1 74 DPEPGRCRRTDGKKWRCSKDAHPDSKYCERHMNRGRYRSRKLVES 118 79***************************************9986 PP
2	QLQ	50.3	7.4e-18	14	48	2	36
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiq 36 FT aQ++++++Q+l++KyL a++PvP+eLl++i+ PCP022207.1 14 LFTVAQWAEMENQALIFKYLKAGLPVPSELLAPIR 48 6********************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 326 aa Download sequence
MSWSSVGTGG HAPLFTVAQW AEMENQALIF KYLKAGLPVP SELLAPIRTS FNLISPNFLR 60 HHPTLASYSG KKMDPEPGRC RRTDGKKWRC SKDAHPDSKY CERHMNRGRY RSRKLVESQT 120 SSQSLSTVTS DSVIGICSHS GSFQSMPLHS MGNSGALCFG SNASELKMEG IPYGVSNRGT 180 RGFNGSEEHN FVSEAMSARC LRADSNVDNP WLLMAPQVPL KLEPRNSSLW LNNSSHLQTL 240 QNMEPLSVNA EITKQQYVGE EFGLPGSQKH EQHSLQPFFD EWPKSKDLGF HQNDNRSNIT 300 ELSMSNATVP AKFFPRSAES PHDAYT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37740.1	4e-37	GRF family protein