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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PCP021889.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
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Family | ERF | ||||||||
Protein Properties | Length: 229aa MW: 25156.2 Da PI: 6.3982 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 59.3 | 9.3e-19 | 95 | 144 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 ++GVr+++ +g+++AeIrdp++ng +r++lg++ tae+A a+++a+ k++g PCP021889.1 95 FRGVRRRP-WGKYAAEIRDPKKNG--ARIWLGTYETAEDAGLAYDRAAFKMRG 144 89******.***********9998..*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 229 aa Download sequence |
MSTESISSSN WALLESIRQH LLHDDFETQE TFLADVAEFD APLLSSPSTP SSSNAHFLVE 60 GLDDTMGIMN HALDTSNNFE VAACVVQVPQ RGWNFRGVRR RPWGKYAAEI RDPKKNGARI 120 WLGTYETAED AGLAYDRAAF KMRGSKAKLN FPHLIGTHDS EPGRVASKRC SLEPSSSSVL 180 SSDGGGSPTL KRKRNVVCSV AKAKLEEGDE PFQVFQLESF SLGSHLLLN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G44840.1 | 4e-43 | ERF family protein |