PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP021848.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

ERF

Protein Properties

Length: 498aa MW: 56096.1 Da PI: 5.9447

Description

ERF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP021848.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	52.8	9.8e-17	70	130	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpse..ng.....krkrfslgkfgtaeeAakaaiaarkkleg 55 + y+GVr++ +g+WvAeIr+p +g k+ r +lg+f ta eAa a+++a+++++g PCP021848.1 70 CVYRGVRQRT-WGKWVAEIREPIHatGGavpkkKNNRLWLGTFPTAWEAALAYDKAARSMYG 130 68***999.******866865598555********99**********998 PP

Sequence ? help Back to Top
Protein Sequence Length: 498 aa Download sequence
MASEASDGDR KLRKRRYGCD SIEDTLARWK NYNERLDFEK DGGTKTRRVP AKGSTKGCMR 60 GKGGPENSSC VYRGVRQRTW GKWVAEIREP IHATGGAVPK KKNNRLWLGT FPTAWEAALA 120 YDKAARSMYG ALARLNFAKN TMDLKDYCSS FVSPTMTKTS SHESSSTYNS ADQTEERSGF 180 FENCLPREPK QEMVCAEGLV TEELELSNAT LREPKAVKRE YKTERELVKN GVVFQTGSYG 240 SFDHRGDYLR NEVPAVNFDS VFDGKTRNDV DSLEILLRSN YAHLTELGEG ECNQRNGCNP 300 SNGVKFETPA MREAVVKEFP VILESGSHNG LDDKYNNMHN EQKNVPSDDA GMKGSITGQQ 360 LLGGLAETTK LNGHNRDGFI HTYACLDDLD VSYNPGYGIN ASNDIGMQRE LDDRLEYMHN 420 WSAEKTYGID AAQEQQWERM HCRPIQFQTQ PQVDIPGSSN HTQDGYLDVD FGSDLVRQSY 480 HSGVMEEQGL HYSWFPYS

Sequence ? help Back to Top

Protein Sequence Length: 498 aa Download sequence

MASEASDGDR KLRKRRYGCD SIEDTLARWK NYNERLDFEK DGGTKTRRVP AKGSTKGCMR  60
GKGGPENSSC VYRGVRQRTW GKWVAEIREP IHATGGAVPK KKNNRLWLGT FPTAWEAALA  120
YDKAARSMYG ALARLNFAKN TMDLKDYCSS FVSPTMTKTS SHESSSTYNS ADQTEERSGF  180
FENCLPREPK QEMVCAEGLV TEELELSNAT LREPKAVKRE YKTERELVKN GVVFQTGSYG  240
SFDHRGDYLR NEVPAVNFDS VFDGKTRNDV DSLEILLRSN YAHLTELGEG ECNQRNGCNP  300
SNGVKFETPA MREAVVKEFP VILESGSHNG LDDKYNNMHN EQKNVPSDDA GMKGSITGQQ  360
LLGGLAETTK LNGHNRDGFI HTYACLDDLD VSYNPGYGIN ASNDIGMQRE LDDRLEYMHN  420
WSAEKTYGID AAQEQQWERM HCRPIQFQTQ PQVDIPGSSN HTQDGYLDVD FGSDLVRQSY  480
HSGVMEEQGL HYSWFPYS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	9	16	DRKLRKRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G40340.1	7e-39	ERF family protein