PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP021557.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family ERF
Protein Properties Length: 304aa    MW: 33860.4 Da    PI: 7.2334
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP021557.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.81.5e-19151200255
          AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                  +y+GVr+++ +g+W+AeIrdp   + + +r++lg+f tae Aa a+++a+++++g
  PCP021557.1 151 HYRGVRRRP-WGKWAAEIRDP---N-KaARVWLGTFNTAEAAALAYDRAALRFKG 200
                  69*******.**********9...3.35***********************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 304 aa     Download sequence    
MKVTHPQHDL DVRDYELGSE FSWLTSLRLS IIPPNSLLST PQSQPTHTLA EAHEDYDKVD  60
LKHGKRPLAS VESEEKEEDQ IFPVYSARSQ QDTSAMVSAL AQVIGNNSDQ INNPLDQVQG  120
ISSLITSQSS PTETQSQPVL LQDQGNLRRQ HYRGVRRRPW GKWAAEIRDP NKAARVWLGT  180
FNTAEAAALA YDRAALRFKG SKAKLNFPER VVQGSSESGC LTLTTQLQYS LNNIPPEANI  240
SRPTYSNVFD YARYNNVTST SSSSMPSQQA AELQSFSMQF GSSSSSSSVP PYKYRKDFDG  300
SHSR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G07310.11e-44ERF family protein