PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP018757.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

WRKY

Protein Properties

Length: 538aa MW: 59044 Da PI: 7.3004

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP018757.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	95.1	4.9e-30	303	361	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +Dg++WrKYGqK+ kg+++pr+YYrCt++ gCpv+k+v+r+aed +++++tYeg+Hnh+ PCP018757.1 303 SDGCQWRKYGQKMAKGNPCPRAYYRCTMRtGCPVRKQVQRCAEDRTILTTTYEGHHNHP 361 7*************************99**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 538 aa Download sequence
MESSDSDHSI HNCRFVLSSE MTNDYNHGKR VVDELDFFAD KGHLKEDRDH TAEVKEECER 60 HGVGQEKQLP DVNIGLNLLT TNTSSEKSSM DDGTSSSHTT ENKHRTNQLA VLRAELGRMN 120 VENQQLRGAI HQLNTHYQAL QVHLVTLMQR QKNQKTDYQT AEQHKMNING SVVLEEKQMM 180 NGINNLAPRQ FMDMGRAEKD ELSQCSHEGC RSQDCSRSPP QNDIVESMEC CKSTSHVHRD 240 ISGRSRTAGG EDSPDQELQG RIPKKVPKLM SPREVDQPSS EAMSMIKKAR VSVRARSEAS 300 MISDGCQWRK YGQKMAKGNP CPRAYYRCTM RTGCPVRKQV QRCAEDRTIL TTTYEGHHNH 360 PLPPAAMAMA STTSAAASML LSGSMPSADG LISSNSFLAR TGLPNCPPSL ATLSASAPFP 420 TVTLDLTRTP TSSEMPLGQP NQLPPNFPHN NLMSVPQVLG QALCNQSKFS VLNSLQGLDS 480 TTHSLADKIS AATAAITADP NFTAALVAAI TSIVGNGHSN NNTYNNIATR NNSDDNTK

Sequence ? help Back to Top

Protein Sequence Length: 538 aa Download sequence

MESSDSDHSI HNCRFVLSSE MTNDYNHGKR VVDELDFFAD KGHLKEDRDH TAEVKEECER  60
HGVGQEKQLP DVNIGLNLLT TNTSSEKSSM DDGTSSSHTT ENKHRTNQLA VLRAELGRMN  120
VENQQLRGAI HQLNTHYQAL QVHLVTLMQR QKNQKTDYQT AEQHKMNING SVVLEEKQMM  180
NGINNLAPRQ FMDMGRAEKD ELSQCSHEGC RSQDCSRSPP QNDIVESMEC CKSTSHVHRD  240
ISGRSRTAGG EDSPDQELQG RIPKKVPKLM SPREVDQPSS EAMSMIKKAR VSVRARSEAS  300
MISDGCQWRK YGQKMAKGNP CPRAYYRCTM RTGCPVRKQV QRCAEDRTIL TTTYEGHHNH  360
PLPPAAMAMA STTSAAASML LSGSMPSADG LISSNSFLAR TGLPNCPPSL ATLSASAPFP  420
TVTLDLTRTP TSSEMPLGQP NQLPPNFPHN NLMSVPQVLG QALCNQSKFS VLNSLQGLDS  480
TTHSLADKIS AATAAITADP NFTAALVAAI TSIVGNGHSN NNTYNNIATR NNSDDNTK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G62300.1	2e-99	WRKY family protein