PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP018391.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family ERF
Protein Properties Length: 285aa    MW: 32397.3 Da    PI: 6.2647
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP018391.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP255.41.5e-17107157155
          AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55 
                  ++y+GVr+++ +g+W+AeIrdp     +   r++lg+f taeeA   +++a+ +++g
  PCP018391.1 107 KKYRGVRRRP-WGKWAAEIRDP-----HrgVRVWLGTFETAEEAGMTYDKAAIAFKG 157
                  59********.**********6.....337**********************99887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 285 aa     Download sequence    
MDGPKQRTQS RTVTNKLVKT LTTHFHESNA GRAPKIVRIF VTDDNATDSS GDEEEPSPSR  60
KHRVLVKRVI NEVRIEDSSS QTILLPKPKA RRCRPVEESN EVSPNGKKYR GVRRRPWGKW  120
AAEIRDPHRG VRVWLGTFET AEEAGMTYDK AAIAFKGPLA LTNFLKPPEN AIPDNSDVDC  180
NQISQSPHNS DCNHCVRSPT SVLSGRDAEI VWKPVVGVSE RQNFGAVDTE FWLKDCFEPP  240
ICFDEMRVVP ETLLKDEDFS DLSLDFRSCN WDDVEYYFQG AYELK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27950.13e-35ERF family protein