PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP017372.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family bHLH
Protein Properties Length: 362aa    MW: 39077.2 Da    PI: 4.6792
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP017372.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH17.29.3e-062532901254
                  HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
          HLH  12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                  R +++ +++  L++l+ +      +K + a++L +A+eYIk L
  PCP017372.1 253 RKEKLGDRITALQQLVSPF-----GKTDTASVLHEAIEYIKFL 290
                  677888999*******998.....8****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 362 aa     Download sequence    
MAEEFQAGIC GGNSWWNSSR HVLAASPCSM GFNDHMGGFG YPNDMVDIKA TRSSCGEINN  60
SVSDDHDDGD HSKSIANFDQ YQDVQKPDHD PTLQMLGFGL PSSLSSTPSD FNQALLVSRS  120
SSGRGESTFH NPMLQEDMGL NTKLNTAALG DEESSSIING FKPMNQDFSL DQLGSPSSSG  180
FPISSSSSAA NSYGFSSALM LQTLFDSVPA NTNEDVQDSS SSVVKKSSSS ACEPVFKRAR  240
IETPSPLPTF KVRKEKLGDR ITALQQLVSP FGKTDTASVL HEAIEYIKFL HDQVSVLSTP  300
YMKNGAPMQQ QQGIDKMKEA SEGAKQDLQS RGLCLVPISS TFPVANETTA DFWTPTFGAT  360
FR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G61660.37e-57bHLH family protein