PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP017205.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family CO-like
Protein Properties Length: 340aa    MW: 37840.5 Da    PI: 6.3107
Description CO-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP017205.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-B_box301.1e-09443437
     zf-B_box  4 rkCpeHeekelqlfCedCqqllCedClleeHkg......H 37
                 + C+ +++ +++lfC+ ++ +lC +C +++H        H
  PCP017205.1  4 KLCDSCQSAKATLFCRADSAFLCVNCDSKIHAAnklasrH 43
                 58******99*********************554555555 PP
2zf-B_box26.91e-084691342
     zf-B_box  3 erkCpeHeekelqlfCedCqqllCedClleeHkg......Htvvpl 42
                  + C+ +e+ +++  C+ ++  lC +C   +H+       H++vp+
  PCP017205.1 46 VWLCEVCEQAPVHVTCKADDAALCVTCDRDIHSAnplsrrHERVPV 91
                 689*****************************66899999999986 PP
3CCT68.32.1e-23279322144
          CCT   1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkqa 44 
                  R a++lRY+eKrk+RkFeK+irY+sRKa+Ae+RpR+KGrF+k++
  PCP017205.1 279 RVARVLRYREKRKNRKFEKTIRYASRKAYAETRPRIKGRFAKRT 322
                  89****************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 340 aa     Download sequence    
MASKLCDSCQ SAKATLFCRA DSAFLCVNCD SKIHAANKLA SRHPRVWLCE VCEQAPVHVT  60
CKADDAALCV TCDRDIHSAN PLSRRHERVP VTPFYDSVNS AADSVPAVKS VVNFLDNRYL  120
SDVDGETEVS REEAEAASWL LPNPKAMENP DLNSGQYLFQ EMDPYLDLDY GHVDPKLEEA  180
QEQNSCGADG VVPVRSKNMQ PLLVNDQSFE LDFSAGSKPF VYGYHHAQCL SQSVSSSSMD  240
ISVVPDSNAV TDASDAYTKS LTTAVETSQL AVQLSSADRV ARVLRYREKR KNRKFEKTIR  300
YASRKAYAET RPRIKGRFAK RTEVEIEAER MCRYGVVPSF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G24930.11e-137CO-like family protein