PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PCP016938.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
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Family | GATA | ||||||||
Protein Properties | Length: 280aa MW: 31437 Da PI: 6.7695 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 62.3 | 5.8e-20 | 202 | 235 | 1 | 34 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 C++C++tkTp+WR+gp g+ktLCnaCG++yr+ + PCP016938.1 202 CTHCQVTKTPQWREGPLGPKTLCNACGVRYRSGR 235 *******************************987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 280 aa Download sequence |
MDGSLPTDGA FNYESVLSND ILSALDFPME DIDDSVEDND WDTKFQDIEP PPNIDQLLGS 60 GIFSYDDKKK HTNLSTPYEQ MYQPQFPSVT CETIRSKGSL RNDDHESIGS CAAQFEPKFE 120 KRTRSKLSRS RRANPVIFST QFIPSTSSNS SATENLYHWD ACKFDIESSR TEDMLNTTKR 180 KQKKTGKLTT DEPGESREAK KCTHCQVTKT PQWREGPLGP KTLCNACGVR YRSGRLFPEY 240 RPAASPTFVA AVHSNSHKKV IELRSKGCQE AVMGILSSAQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G54810.2 | 1e-38 | GATA family protein |