PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP015314.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

GeBP

Protein Properties

Length: 391aa MW: 42640 Da PI: 9.1774

Description

GeBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP015314.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF573	117.4	7.9e-37	166	258	1	97
DUF573 1 klfqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiWg 97 klfqr+ws+eDe+++L+G++d+++k+g++p++d+ af++f+kks++++v+ksql KirrLKkK+ ++vkk k+ +++k+hdqk+f+lskk+Wg PCP015314.1 166 KLFQRIWSDEDEVIILKGMVDYTTKKGADPYSDMGAFHDFIKKSLKVDVNKSQLQAKIRRLKKKYATNVKK----KKYNLTKAHDQKVFDLSKKVWG 258 579******************************************************************....8999***************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 391 aa Download sequence
MAPKRPSPLD EPPAASSSGG EEVSSEEEEG EEEESGSGSD SEPEEPLPPK TSSSAPVAEK 60 KPPPKKPDSS AANSKPQFSS SGSEDDSGSD VDKDLVVKPI ASKPMEETPK TKRPRSKPAA 120 TATPAAKSGS KRPSETEPKD SKRPKKKGAA VEQEPDQVEE EAKKCKLFQR IWSDEDEVII 180 LKGMVDYTTK KGADPYSDMG AFHDFIKKSL KVDVNKSQLQ AKIRRLKKKY ATNVKKKKYN 240 LTKAHDQKVF DLSKKVWGGS GEGSSGVNEP SEQPKSNGKA RNTKTLASIK ADILSSPERS 300 KEATKVDLGL NPCSSEGLSE VIGFDKCFRE LGLPEGVVKQ GLELIGESKR ADLKEKWRKL 360 HVAELELFVK RSELMRDQTK VILEALRSSG H

Sequence ? help Back to Top

Protein Sequence Length: 391 aa Download sequence

MAPKRPSPLD EPPAASSSGG EEVSSEEEEG EEEESGSGSD SEPEEPLPPK TSSSAPVAEK  60
KPPPKKPDSS AANSKPQFSS SGSEDDSGSD VDKDLVVKPI ASKPMEETPK TKRPRSKPAA  120
TATPAAKSGS KRPSETEPKD SKRPKKKGAA VEQEPDQVEE EAKKCKLFQR IWSDEDEVII  180
LKGMVDYTTK KGADPYSDMG AFHDFIKKSL KVDVNKSQLQ AKIRRLKKKY ATNVKKKKYN  240
LTKAHDQKVF DLSKKVWGGS GEGSSGVNEP SEQPKSNGKA RNTKTLASIK ADILSSPERS  300
KEATKVDLGL NPCSSEGLSE VIGFDKCFRE LGLPEGVVKQ GLELIGESKR ADLKEKWRKL  360
HVAELELFVK RSELMRDQTK VILEALRSSG H

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	224	237	RRLKKKYATNVKKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G61730.1	2e-30	GeBP family protein