PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP015010.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family GRAS
Protein Properties Length: 741aa    MW: 83169.3 Da    PI: 6.5308
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP015010.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS381.11.3e-1163697392374
         GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaN 99 
                  ++lL++cA+av+++d++ a++lL+++++++sp gd +qRla++f+++L+arla+++s++yk l +++ts    ++ l+a++l+  +sP+ k+s+++ N
  PCP015010.1 369 RTLLISCAQAVAADDHRTANELLKKVRQHSSPFGDGTQRLAHCFANGLEARLAGTGSKIYKGLVSKRTS---AADILKAYHLYLAASPFKKMSNFVSN 463
                  689************************************************************999999...9************************* PP

         GRAS 100 qaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledleleeLr 195
                   +I++ +e+++r+H+iDf+i +G+QWp+L+q ++ R++gpp++RiTg++ p++g   +e++eetg+rLa +Ae+++vpfe+n  +ak++e+++leeL+
  PCP015010.1 464 VTIMNLAEKSTRLHVIDFGILYGFQWPTLIQRISWREGGPPKVRITGIEFPQPGfrPAERVEETGRRLAAYAEKFNVPFEYNS-IAKKWETITLEELK 560
                  *****************************************************9*****************************.7************* PP

         GRAS 196 vkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgre 293
                  ++++E+l+Vn+ ++ ++lldesvs++s r++vL+l+++++P+++++   +  +n++ F++rf eal ++s+lfd+le+ +pre++er+ +E+e++gre
  PCP015010.1 561 IDKDEVLVVNFLYRGKNLLDESVSMDSVRSRVLDLIRRINPDIFIHGVVNGAYNAPFFVTRFREALFHFSSLFDMLETVVPREDQERMLIEKEIFGRE 658
                  ************************************************************************************************** PP

         GRAS 294 ivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                  + nv+aceg er+er et+++W+ r  +aGF ++p++ + +k a   ++  + + + ++e+s +l++gWk+r+ +++SaW+
  PCP015010.1 659 ALNVIACEGWERVERPETYKQWHVRNLRAGFVQIPFDRELVKAAAKKVSSLYHKDFVIDEDSRWLLQGWKGRTAFALSAWK 739
                  ********************************************99999999888*************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 741 aa     Download sequence    
MDPRRRGSSD SFNGVQRGNQ PLPTLSHPTV VAGSRFDSNT FLDNSYRNFS CPQPGLAANS  60
VSSYSSVSPE DDSAEDCDFS DVVLKYINQM LMEEDMEDKT CMLKESLELQ AAEKSFYEVL  120
GKKYPPSPEL FRRYASQYGE SPAESSSGTW SNYITSSCNS GGYFGDTTSI QSPDGYSSQL  180
QGLPSDRISQ SFNGYGLVDS PNSSIYTPDW NTESQSVWQF NKGVEEASRF LPGETNLVVE  240
LEANGMSVHT PKVGAAASYV KVERTDEGEY SSGGSRGKKN LHREDEDVEE KRSSKQAAFS  300
SESPLRSEMF DVVLLCSTGE GQERLESLRE ALQNGMSKSV IQNRQSEGSN GGKGRGKKQS  360
VKKEVVDFRT LLISCAQAVA ADDHRTANEL LKKVRQHSSP FGDGTQRLAH CFANGLEARL  420
AGTGSKIYKG LVSKRTSAAD ILKAYHLYLA ASPFKKMSNF VSNVTIMNLA EKSTRLHVID  480
FGILYGFQWP TLIQRISWRE GGPPKVRITG IEFPQPGFRP AERVEETGRR LAAYAEKFNV  540
PFEYNSIAKK WETITLEELK IDKDEVLVVN FLYRGKNLLD ESVSMDSVRS RVLDLIRRIN  600
PDIFIHGVVN GAYNAPFFVT RFREALFHFS SLFDMLETVV PREDQERMLI EKEIFGREAL  660
NVIACEGWER VERPETYKQW HVRNLRAGFV QIPFDRELVK AAAKKVSSLY HKDFVIDEDS  720
RWLLQGWKGR TAFALSAWKP A
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37650.10.0GRAS family protein