PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP014911.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

NAC

Protein Properties

Length: 1441aa MW: 162670 Da PI: 6.8656

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP014911.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	90.1	3.7e-28	512	653	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk......leleevikevd....iykvePwdLpkkvkaeekewyfFskrdkkyatgkrknra........tks 80 lp+G++F+P+d el+ +L++k+ + + +e+i++++ i++ +P++Lp + +++ ++++fF+k+ ++yatg+rk+r+ ++ PCP014911.1 512 LPVGVKFDPSDGELL-VHLAAKCGVGNsqphllI--DEFIPTLEgdngICYDHPKNLPGA-TKDGSSIHFFHKTMNAYATGQRKRRKvdsqrsvaSED 605 799**********.678888765554566432..334554423345******44.4567899**************868888777669 PP NAM 81 gyWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128 +W++tgk+k++l+ + ++g kk++v+y +++ k+ek +Wvmh+y+l PCP014911.1 606 VRWHKTGKTKAILE--NGVKGWKKIMVLYksSKKGTKPEKVNWVMHQYHL 653 99*******9..6689*****4434666778*******98 PP

Sequence ? help Back to Top
Protein Sequence Length: 1441 aa Download sequence
MGSGNGVYSV GNFDLDGKWL IDPKQLFVGP RIGEGAHAKV YEGKYKNQNV AVKIVPRGET 60 PEEIAKREGR FAREVAMMSK VQHKNLVKFI GACKEPVMVI VTELLLGGTL RKYLFNMRPR 120 CLDTCVAVGF ALDIARAMEC LHSHGIIHRD LKPENLILTA DHKTVKLADF GLAREESLTE 180 MMTAETGTYR WMAPELYSTV TLRHGEKKHY NHKVDAYSFA IVLWELIHNK LPFEGMSNLQ 240 AAYAAAFKNV RPSAESLPED LALIVTSCWK EDPNDRPDFT QIIQMLLHYL STISAPAPAI 300 PQRIFKSENA VLPPESPGTS SLMATHNSGE TTKTNTDMED KTRGFRAPTK ARQDSFVRSE 360 PQPRTQVSST SGPHCESLAA GPRPRRPKIL SPNLRPGGKG SSGPKLDFPA HTDTLPLCFN 420 LVQWRKGRAL SLSPLSLSKT PYKLGRASSN AVSYFEEMAR AWLINSRGLA SKVKNAARST 480 ACPIKECGAN RECPNCHFVI DNSDVLSEWP GLPVGVKFDP SDGELLVHLA AKCGVGNSQP 540 HLLIDEFIPT LEGDNGICYD HPKNLPGATK DGSSIHFFHK TMNAYATGQR KRRKVDSQRS 600 VASEDVRWHK TGKTKAILEN GVKGWKKIMV LYKSSKKGTK PEKVNWVMHQ YHLGAEEDER 660 EGDYVVSKIF YQQHKQSERN DNNGVAEDSD VNALRTSPRT PVSSPPIPPR PGKSVWFEDV 720 PDEAMLRSSV KEPELAQEAY HVPQPNTRFE DNIGEPTWLA GESQADDLHS LEETLLCKEI 780 FASAPNIISN TDFNNNTYEV NGNSSTSCGL RDLENIGLDS PPDFQLPDLQ FSSQDSLLNW 840 LDRATRQLQR FKIIMEFPLA LCNFSEHMKS MSTSRGSSSM RSKVAKRMQK ESGKTLREVR 900 RAKKLQKKLM TENERLIYNL KRAKRKVALL LQKLKKYELP DLPSPRHDPE LVTLEQLQAL 960 KKIGFKNKNY VPVGVRGVFG GVVQNMHLHW KFHETVQVCC DNFPKEKIKE MASMIARLSG 1020 GIVALFKARF EQALESQKLN IKKIEQQLRQ SGINPEDPVA IASIQRVASS FFNAIDQKDG 1080 SPYIFHGDKP SVAEPDNKFK HPEPPDEEEE EELDKFIAEI EDAAEREWAA EEAAEKEEFT 1140 RMRYWNREEY GGRFRRSEEP ENDDSDDEIP RVRDWRQTHG KQRPNGDYED DDEEWRSNNV 1200 VGSSVLDSDA DDSDGTPEKF KISPRDRGRQ DKIGRAKNDE HFYRNSEANN RKANNRKIMV 1260 DDGTESENVL SDLDTAMWKF NSEEEHDSTA SRAANYDFRS SSDEEEDLTY TKGGKEWVND 1320 SESNTVYSNK ARGKFEASRV AEGKHDRRIG RGNSEYFKRN ADVSTRRKPV EEDVKSKDIS 1380 GDSENEIWEL NAASDSGAST GRINYNSSDE EDYQVRREEK KGNGNKSTRT RKDLDEVWDS 1440 D

Sequence ? help Back to Top

Protein Sequence Length: 1441 aa Download sequence

MGSGNGVYSV GNFDLDGKWL IDPKQLFVGP RIGEGAHAKV YEGKYKNQNV AVKIVPRGET  60
PEEIAKREGR FAREVAMMSK VQHKNLVKFI GACKEPVMVI VTELLLGGTL RKYLFNMRPR  120
CLDTCVAVGF ALDIARAMEC LHSHGIIHRD LKPENLILTA DHKTVKLADF GLAREESLTE  180
MMTAETGTYR WMAPELYSTV TLRHGEKKHY NHKVDAYSFA IVLWELIHNK LPFEGMSNLQ  240
AAYAAAFKNV RPSAESLPED LALIVTSCWK EDPNDRPDFT QIIQMLLHYL STISAPAPAI  300
PQRIFKSENA VLPPESPGTS SLMATHNSGE TTKTNTDMED KTRGFRAPTK ARQDSFVRSE  360
PQPRTQVSST SGPHCESLAA GPRPRRPKIL SPNLRPGGKG SSGPKLDFPA HTDTLPLCFN  420
LVQWRKGRAL SLSPLSLSKT PYKLGRASSN AVSYFEEMAR AWLINSRGLA SKVKNAARST  480
ACPIKECGAN RECPNCHFVI DNSDVLSEWP GLPVGVKFDP SDGELLVHLA AKCGVGNSQP  540
HLLIDEFIPT LEGDNGICYD HPKNLPGATK DGSSIHFFHK TMNAYATGQR KRRKVDSQRS  600
VASEDVRWHK TGKTKAILEN GVKGWKKIMV LYKSSKKGTK PEKVNWVMHQ YHLGAEEDER  660
EGDYVVSKIF YQQHKQSERN DNNGVAEDSD VNALRTSPRT PVSSPPIPPR PGKSVWFEDV  720
PDEAMLRSSV KEPELAQEAY HVPQPNTRFE DNIGEPTWLA GESQADDLHS LEETLLCKEI  780
FASAPNIISN TDFNNNTYEV NGNSSTSCGL RDLENIGLDS PPDFQLPDLQ FSSQDSLLNW  840
LDRATRQLQR FKIIMEFPLA LCNFSEHMKS MSTSRGSSSM RSKVAKRMQK ESGKTLREVR  900
RAKKLQKKLM TENERLIYNL KRAKRKVALL LQKLKKYELP DLPSPRHDPE LVTLEQLQAL  960
KKIGFKNKNY VPVGVRGVFG GVVQNMHLHW KFHETVQVCC DNFPKEKIKE MASMIARLSG  1020
GIVALFKARF EQALESQKLN IKKIEQQLRQ SGINPEDPVA IASIQRVASS FFNAIDQKDG  1080
SPYIFHGDKP SVAEPDNKFK HPEPPDEEEE EELDKFIAEI EDAAEREWAA EEAAEKEEFT  1140
RMRYWNREEY GGRFRRSEEP ENDDSDDEIP RVRDWRQTHG KQRPNGDYED DDEEWRSNNV  1200
VGSSVLDSDA DDSDGTPEKF KISPRDRGRQ DKIGRAKNDE HFYRNSEANN RKANNRKIMV  1260
DDGTESENVL SDLDTAMWKF NSEEEHDSTA SRAANYDFRS SSDEEEDLTY TKGGKEWVND  1320
SESNTVYSNK ARGKFEASRV AEGKHDRRIG RGNSEYFKRN ADVSTRRKPV EEDVKSKDIS  1380
GDSENEIWEL NAASDSGAST GRINYNSSDE EDYQVRREEK KGNGNKSTRT RKDLDEVWDS  1440
D

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G01600.1	8e-89	NAC family protein