PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP013737.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family WOX
Protein Properties Length: 307aa    MW: 33903.1 Da    PI: 7.4916
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP013737.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox62.75.5e-20667257
                 T--SS--HHHHHHHHHHHHH..SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
     Homeobox  2 rkRttftkeqleeLeelFek..nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                 ++R+t+t++q+++L++l+++   r psae+++++++kl    +++ ++V++WFqN++a+e++
  PCP013737.1  6 STRWTPTTDQIKILKDLYYNngIRSPSAEQIQRISAKLrqfgKIEGKNVFYWFQNHKARERQ 67
                 58*****************8567*************************************97 PP
2Wus_type_Homeobox113.31.2e-36569265
  Wus_type_Homeobox  2 artRWtPtpeQikiLeelyk.sGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65
                       ++tRWtPt++QikiL++ly+ +G+r+P++e+iqri+a+L+++Gkie+kNVfyWFQN+kaRerqk+
        PCP013737.1  5 SSTRWTPTTDQIKILKDLYYnNGIRSPSAEQIQRISAKLRQFGKIEGKNVFYWFQNHKARERQKK 69
                       789***************9779*****************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 307 aa     Download sequence    
MCRQSSTRWT PTTDQIKILK DLYYNNGIRS PSAEQIQRIS AKLRQFGKIE GKNVFYWFQN  60
HKARERQKKR FTSSSAPDHH HHAAPPVPAV PPEANNIRQR SSGVGIDINA TAAAAYEQLP  120
INHHSKYSNI SAPPAGFSSA SSSSVGVNVS VGAQMGNYGY GSIAMEKSFR ECSISSGGST  180
STGHVGGSNY DTFNHNYGSW VGVDPYSSPY TIFDKKSSSK PVFDDQENMT EEEYYNLQAS  240
QEIETLPLFP MHGEDIHGFG NIKSSSMDGY YSGWYHSGGG NDGGSRTSLE LSLNSYGHMT  300
HDYFRSY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G17950.11e-49WOX family protein